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13_1_40cm_scaffold_610_1

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(3..623)

Top 3 Functional Annotations

Value Algorithm Source
pilT; Twitching mobility protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 207.0
  • Bit_score: 330
  • Evalue 1.60e-87
Twitching motility protein id=4140654 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 207.0
  • Bit_score: 268
  • Evalue 5.20e-69
pilus retraction protein PilT similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 207.0
  • Bit_score: 217
  • Evalue 5.10e-54

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGACCTCGACAAGCTGCTCATCAGAAGCGTCGAGCGCGGCGCGTCCGACCTGCACCTCAAGCCGAACTCGCCCCCGGTCCTTCGCGTCCACGGCCGGCTGGTGCCCCAGCCCGATCTCGGCGTGGTCAGCGTCGGCGAGATGGAGGACATGGCTCGGCACGTCCTCAGCGAGCGCAGCTACGGCCAGCTCAAGGACGGGCGTGAGGTCGACATCGCCTATGCGGTGCGCGACCACGGCCGTTTCCGCGTCAACCTCTTCCTCGCCACTGGCCACATCCGTGCCGTGATGCGGGCCATCCCGGCGAAGAAGCCGAAGTTCGAGGAGCTCGGCCTGCCCCAGGTGCTCGAGAAGCTGGCCATGGAGCGGCGGGGTATGGTCCTCGTCACCGGCATCACGGGCTCGGGCAAGTCCACGACGCTGGCGGCGATGATCGACTTCATCAACCGCAACCGCAACGACCACATCATCACCATTGAGGATCCGATCGAGTTCTCGCACGAGGACATCAACTGCGTGGTCAGCCAGCGGGAGATCGGCCACGACTCGTCGAACTTCGCCAGCGCGCTGCGGGCCGCGCTTCGCGAGGATCCCGACGTCATCCTGGTCGGCGAGATGCGC
PROTEIN sequence
Length: 207
MDLDKLLIRSVERGASDLHLKPNSPPVLRVHGRLVPQPDLGVVSVGEMEDMARHVLSERSYGQLKDGREVDIAYAVRDHGRFRVNLFLATGHIRAVMRAIPAKKPKFEELGLPQVLEKLAMERRGMVLVTGITGSGKSTTLAAMIDFINRNRNDHIITIEDPIEFSHEDINCVVSQREIGHDSSNFASALRAALREDPDVILVGEMR