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13_1_40cm_scaffold_3290_5

Organism: 13_1_40CM_Actinobacteria_66_12

partial RP 21 / 55 BSCG 18 / 51 ASCG 4 / 38
Location: comp(4517..8011)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RBG_16_Chloroflexi_64_32_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 999.99
  • Bit_score: 879
  • Evalue 5.10e-252
Transcription-repair-coupling factor n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYW6_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 999.99
  • Bit_score: 836
  • Evalue 3.50e-239
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 999.99
  • Bit_score: 836
  • Evalue 9.90e-240

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Taxonomy

RBG_16_Chloroflexi_64_32_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 3495
GTGACGGCATTGTGGGAGCGGATGCTGGACGCGGCGCCGGAGCTGCGGCGGTGGACTTCGTCGCCGGGCGCCGGCGAACTCCGCATCGCGCGACTGCCCAGGCCCGCATGGCCGATCGTGGCGGGCTCGGTGGTGCGCGCCGCCGTCGACGCCGGCCGCTCGGTGCTCATCCTGGTGGCCGCGCCGGATCGGTTCGCCGACGACTTGCGGCCCTGGCTCGCCGGCCGGCCCCCTGCCTACGTCTTCGCGGAGGTCGCGGTCTCGTTCCTCGACCGTCCGCCCGCTTTCGACGAGGCGGTGAGCAAGCGGATGGAGGCGCTGAACGCTTTCGCGCCGGGAGCATCCCCATCTGTCGTCGTGTCGTCGCGACGGGCCATCACCCGCGCGACCATCTCTCCCGCCGACCTTGCACAGGGCACCCTGGTCCTTGCGCCCGGCGGAGGCCCAGACCCGGTCGTGGCCGCGGGCCGCCTGGTCGAGATGGGCTATTCGCGAGAGCCGCTCGTTGAGCAGCACGGCCAGTTCTCGCTGCGCGGTGGGATCCTCGACGTCTTTCCGGCGGCGGCCGACTCGCCCGTCCGTGCCGAGTGGTCGGGCGATGTGATCGAGACGCTTCGTCTCTTCGATCCCGAAAACCAGCGCTCGGTGATGGCCGTGCCGTCGATTTCGATCCACCCAGGTCGCGAGCTGCTGCTGGGGGCGCGCCGAGGCGTTGCGGCCGCGAATCGGGTGAAGGAGGGGGTTTCGCTGGAAACGCTGCGTGCTGACGTGCGCGCGGACTGGGACGAGGAGCTGGAGCGGCTCGCGGCAGGAGGTGCGTTTCCCGGCGTCGAGTTCTATTCCGCTTACCTCGATCCGACATTGCCGTCTCTTATCGAGCACATGCCCGAAGGCCTCGCGGTCCTCGACTTCGAACCCGGCCGCCAGCTCGCGGACGCGCGGGTGCTGGTCGAAGAGACGGAGATGCTCGCCGCCGCCGAGTCTGGAGGCGCGGAGCTTCCCCGCGGGTTCGCGCTGCCGGTGGTCCGTGCGGAGCGGCTGCAGGCGATTCCCGGCCATGCGCGATTGGAGATCACGGCGAGTGAGGGGGCAGACGGCGCGATCGATCTCGGCTGGGTGGAGGCTGAGCCTCTGCTGGGCCGGCCGCAGGCGACCGCCCAGCTGACGGCGCTCGCTGCTTCATCGACGGTCGTCTTCGCGACCGAGCAGTCGGAGCGGCTGCGAACATTCCTGGACGAAGGCGGCGTTCGCGAGCATCTGAGGGAGGTCGAGCTCGACATCGACCTCGAGCTCGAGGCCGGTCTGCAGCAGGCTGACATCGACATTGCGGCCGGGGCGGGGCATCAGGGAATTGGATTCCGCCTCGTCACTGACGCCGAGCTCTTTGGACGGCTGCGCCGACCCGGGCGGCCGACCCGCTCGTCACGCGGCCGTGCCGAACAGCTGACCCGCGAGTTCACGCTGGACTTCGCTCCGGGCGAGCTGGTGGTCCACGTCGACCACGGAATCGCGCGATTCGCGGGCATGCGCCTGCTCGAGTCCGACGGCGCGCATCGGGAATACCTGGAGCTCGAGTACGCCGAGGACGACAAGCTGTTTGTGCCGGTCGAGAACCTCGACCGGGTCCAGAAATACCTCGGCGGCGACGCGGAGCCGTCGCTTCACCGGCTCGGCTCGGGCGACTGGTCGCGGGCGCGCGGGCGCGCGCGAAAGGTGGTCGAGGACGTCGCCGAGGAGCTGCTCAAGATCTACTCGCTGCGCGAAGCCAGGCCGGGAATCGCTTTCGCGCCCGACACCGCCTGGCAGCAGGAGCTCGAGTCGTCATTTCCTTATGAAGAGACGCCGGACCAGCTCGCCGCACTGGCAGAGATCAAGGCCGACATGGAGTCCGACCGGCCCATGGACCGGCTGCTGTGCGGTGACGTGGGCTTCGGCAAGACGGAGCTGGCGCTGCGGGCCGCGTTCAAGGCGGCGATGAGCGGCAAGCAGGTGGCCCTGCTCGCGCCGACCACCGTGCTGGCGCAGCAGCACTTCCACGTCTTCACGGAAAGGCTCGCGAAGTTCCCGGTGACGGTCGAGATGCTGTCGCGATTCGTTGACGAAGAGACCCAGGCTCGCACGCTCGAAGGGATCAAGGCGGGCCAGGTGGACATCGTCGTCGGCACACACCGCCTGCTTCAGCGCGACGTTCGCTTCAAGCGGCTCGGACTCTTGATCATCGACGAGGAGCACCGCTTCGGCGTGATGCAGAAGGAGCGGCTCAAGAAGCTCCGCACCCAGCTCGACGTGCTGTCGCTGTCGGCGACGCCGATTCCACGCACGCTGCACATGGCGATTGGCGGCATCCGCGACATGAGCGTGATCCAGACACCGCCCGAGGAACGCCAGCCCATCAAGACCTACGTCACCGCTGATGACGATGAGCTCGTGCGTGAGGCGATCAGTCGCGAGGTGCAGCGCGGTGGCCAGGTCTATTTCGTGCACAACCGAGTGCGCACGATCGAGAAGGCGGCCGACCGTGTGCGCGACCTGGTGCCGAATGCTCGTGTGATCGTCGGCCACGGCCAGATGCCGGAGGACCAGCTTGCGAAGGTGATGGTCGAGTTCGAATCCGCGAAGCACGACGTGCTCGTGTGCTCGACGATCATCGAGTCTGGGCTCGACATCCCCAACGTCAACACGATCATCGTCGAGCGTGCGGACCGGTTCGGCCTGGCGCAGCTTTACCAACTGCGCGGCCGCGTGGGGCGTTCGGGCCGGCGCGCTTACGCGTACTTCCTGTACGACCCTCGCCGCTCGCTCACGGAGAACGCGGACAAGCGGCTCGACGTCATCTCCGGCCTGCACGAGCTCGGCCAGGGTTTCAAGATCGCTCTGCGCGACCTCGAGATCCGCGGCGCCGGCAACCTTCTCGGCACCGAGCAGCACGGCGCCATCGCCGCGGTCGGTTTCGAGATGTACCTTCAGATGCTGCACAGCGCGGTCGGCAAGCTGCGCACGGGTTCGGATGAAACGGCCGTCGGCGACGTGCTCTCGACCGCCGAGATGAACCTCGACCTGCCGCTCGACCACTTCATTCCGCGCTCGTACATCCGGGACGAGAAGCTGAGGCTCGGCGCGTACCGGCAGCTGGCCGCTACCGAAGGCGAGGAGGAGCTGGATTCCGTGCTGCGGTCGCTCCAGGACCGATACGGAACAGGCCCTGCCCAGCTCGCCAACCTCGCCTACTCGCTTCGGGTCAAGCTCCGAGGGCAGAGGCTCGGGTTGCGTGGCGTGGTTTCTGACGGACACGACATCGCCATCCGCGTCGACCCGGAGCGATTCCTCGACGTGGAAGAGCTGTCACGCCGGATGGCGGGCCGTATCTCCATCCTGCCCAACCGCATCAAGATGCGGCGCCAGGGCGAAGGCTGGCAAGGCGACCTGCTCCATCTGCTCGACGAGATGGCAGAGCTGTACGACGCCGGTCGTAAAGTGGCCGCCACATCCCCATGA
PROTEIN sequence
Length: 1165
VTALWERMLDAAPELRRWTSSPGAGELRIARLPRPAWPIVAGSVVRAAVDAGRSVLILVAAPDRFADDLRPWLAGRPPAYVFAEVAVSFLDRPPAFDEAVSKRMEALNAFAPGASPSVVVSSRRAITRATISPADLAQGTLVLAPGGGPDPVVAAGRLVEMGYSREPLVEQHGQFSLRGGILDVFPAAADSPVRAEWSGDVIETLRLFDPENQRSVMAVPSISIHPGRELLLGARRGVAAANRVKEGVSLETLRADVRADWDEELERLAAGGAFPGVEFYSAYLDPTLPSLIEHMPEGLAVLDFEPGRQLADARVLVEETEMLAAAESGGAELPRGFALPVVRAERLQAIPGHARLEITASEGADGAIDLGWVEAEPLLGRPQATAQLTALAASSTVVFATEQSERLRTFLDEGGVREHLREVELDIDLELEAGLQQADIDIAAGAGHQGIGFRLVTDAELFGRLRRPGRPTRSSRGRAEQLTREFTLDFAPGELVVHVDHGIARFAGMRLLESDGAHREYLELEYAEDDKLFVPVENLDRVQKYLGGDAEPSLHRLGSGDWSRARGRARKVVEDVAEELLKIYSLREARPGIAFAPDTAWQQELESSFPYEETPDQLAALAEIKADMESDRPMDRLLCGDVGFGKTELALRAAFKAAMSGKQVALLAPTTVLAQQHFHVFTERLAKFPVTVEMLSRFVDEETQARTLEGIKAGQVDIVVGTHRLLQRDVRFKRLGLLIIDEEHRFGVMQKERLKKLRTQLDVLSLSATPIPRTLHMAIGGIRDMSVIQTPPEERQPIKTYVTADDDELVREAISREVQRGGQVYFVHNRVRTIEKAADRVRDLVPNARVIVGHGQMPEDQLAKVMVEFESAKHDVLVCSTIIESGLDIPNVNTIIVERADRFGLAQLYQLRGRVGRSGRRAYAYFLYDPRRSLTENADKRLDVISGLHELGQGFKIALRDLEIRGAGNLLGTEQHGAIAAVGFEMYLQMLHSAVGKLRTGSDETAVGDVLSTAEMNLDLPLDHFIPRSYIRDEKLRLGAYRQLAATEGEEELDSVLRSLQDRYGTGPAQLANLAYSLRVKLRGQRLGLRGVVSDGHDIAIRVDPERFLDVEELSRRMAGRISILPNRIKMRRQGEGWQGDLLHLLDEMAELYDAGRKVAATSP*