ggKbase home page

13_1_40cm_scaffold_4706_11

Organism: 13_1_40CM_Actinobacteria_66_12

partial RP 21 / 55 BSCG 18 / 51 ASCG 4 / 38
Location: comp(7689..9344)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase I, ATP-dependent (dnl1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 542.0
  • Bit_score: 502
  • Evalue 1.00e-138
Probable DNA ligase id=2876705 bin=GWC2_Chloroflexi_73_18 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 561.0
  • Bit_score: 467
  • Evalue 2.60e-128
DNA ligase I similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 568.0
  • Bit_score: 439
  • Evalue 1.30e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 1656
ATGCTCGATTTCGCACGCACCGGAGCAGCCGTGGGCGGTACAACCGCCACCCTCGAGAAGACCCGCATCCTCGCGGCCTACCTGCGCACGCTGAACGACGCCGATCTGCGCCGGGCGGCGATCTTCATGACCGGCCGTCCGTTCGGACCCTCGCGGCGGAGCACACTCGGGCTGGGTTGGTCGGCGCTCAGCAAGGTGGTCGGCGCCATCTCAGGGCGCGATGAGGACGACCTGCAGCGCATCTTCCGGAAGCACTCGGACCTCGGCGACTGGGCGGGCGAGGCGCTGGACGGACGCACGCAGAACGAGGACACGCCGCTCGAAGATGTCGAGAAGACGTTGGAGGCGATCCGTGCCGCGCGCGGAGCATCCAAAGCCGCGCCGCTCGAGAGCCTGCTGCGCCGCCTTCATCCGGAGGCCGCCCGGTTCGTCGTCAAGGTGATCTCCAGCGAGATGCGCATCGGCCTGAGCGAAGGTCTCGTAGAAGCCGCCATCGCCGAGGCATTCGGCGTGCCTGTGGCGCAGGTGAAACGCATCCACCTCATCACCGGAGATATCGGCGAGGCTGCGGTGAAGGTCAAGAACGGCCAGCTCGAGACGAGCACGGTGACCCTGTTCCAGCCCGTTCGCTTCATGCTCGCGAGCCCGGTCGAGACTGCGACAGAAGCATTCGAACGAATGGGCGCGGACAAGGTCTGGACCGAGGAGAAGTACGACGGCGTCCGCTGCCAGCTTCATCATGTCGATGGTCGGGTCGAGCTCTTTTCACGCGATCTGAAAGAGACCACGAGTGCGTTTCCGGAGCTTGCCGAGGGCGCCACACGTCTCGGTCACGCCGTCCTCTTCGACGGCGAGGTCCTGGCTCATCGAGCTGGTCACGTGCTGCGTTTCTTCGAGCTTCAGCGTCGCCTTGGGCGCAAGAAGGTCACGAGCGAGCTGCGCGGCGAGGTTCCCGTTGTGCTCGTGATATTCGACCTGCTGTACCTCGACGGCCGATCGCTCCTAGACGAACCGCTTGAAGAGCGCCGCCGATTGCTCGAGGGGCTCGCCGTCGAGCACCCCTTTCTGCTGGCGCGACTCGAGGAGGCGACCAGTCCCTCCGATCTCGACCGGATCTTCGCCGACACGCGCGAGCGCGGTCACGAGGGCCTGATGGCCAAGGACCCGGCGAGTCCTTACACGCCCGGGCGGCGCGGCCTCGCATGGCTGAAGCTCAAGCGTCCGCTGGCGACTCTCGACGTCGTGGTGACCGCGGTCGAGTGGGGCCATGGCAAGCGAAAAGGAGTGCTGTCGGACTACACGTTCGCGGTCAAGGACACGGCCACCGGCCGCCTGGTCAACGTGGGCAAGGCATACACCGGTCTGACCGACGCCGAGATCGCCGACATGACCAAGAAATTCCTTGGCATGACGATCGACGATCGGGGCTGGGCTCGGACGGTGAGACCCGAGGTGGTGCTGGAGGTCGCGTTCGACTCGATTCAGCATTCGAGCCGGCACGCGAGCGGATACGCCCTCCGCTTCCCGCGGATCGTCCGCATCCGCGACGACAAGCCGCTCGAGGAGATCGACACGCTGGACCGCGTGGCCGAGCTCTACGAGCGATATTTCGGCGCCCGCGTTGAGGAAAAGCTGTCAGAGGTTGCCGAGACATGA
PROTEIN sequence
Length: 552
MLDFARTGAAVGGTTATLEKTRILAAYLRTLNDADLRRAAIFMTGRPFGPSRRSTLGLGWSALSKVVGAISGRDEDDLQRIFRKHSDLGDWAGEALDGRTQNEDTPLEDVEKTLEAIRAARGASKAAPLESLLRRLHPEAARFVVKVISSEMRIGLSEGLVEAAIAEAFGVPVAQVKRIHLITGDIGEAAVKVKNGQLETSTVTLFQPVRFMLASPVETATEAFERMGADKVWTEEKYDGVRCQLHHVDGRVELFSRDLKETTSAFPELAEGATRLGHAVLFDGEVLAHRAGHVLRFFELQRRLGRKKVTSELRGEVPVVLVIFDLLYLDGRSLLDEPLEERRRLLEGLAVEHPFLLARLEEATSPSDLDRIFADTRERGHEGLMAKDPASPYTPGRRGLAWLKLKRPLATLDVVVTAVEWGHGKRKGVLSDYTFAVKDTATGRLVNVGKAYTGLTDAEIADMTKKFLGMTIDDRGWARTVRPEVVLEVAFDSIQHSSRHASGYALRFPRIVRIRDDKPLEEIDTLDRVAELYERYFGARVEEKLSEVAET*