ggKbase home page

13_1_40cm_scaffold_11774_4

Organism: 13_1_40CM_Gemmatimonadetes_70_12

partial RP 27 / 55 BSCG 20 / 51 ASCG 4 / 38
Location: 2689..5178

Top 3 Functional Annotations

Value Algorithm Source
Putative LmbE-like protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVE1_SOLCM id=5224387 bin=16ft_combo_ws3_JS1 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 862.0
  • Bit_score: 480
  • Evalue 4.50e-132
LmbE family protein Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 838.0
  • Bit_score: 807
  • Evalue 2.30e-230
LmbE family protein similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 834.0
  • Bit_score: 512
  • Evalue 2.30e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2490
GTGCGGCGCACGCTCGCGGCTAGCCTCGCCTTCATCATCGGCGCCGCCGGTTCGGCCGCGGGACAGTTCACCCCGCCCGGCACCGGTGGCGTCGCGGCGCTGGCCGGCGCCTTGAAGCAGCTCGGCGCGAACAAGCGCGTCCTCATGATCGGGGCCCACCCCGACGACGAGTACTCCGATCTGGTCGCCTTCTTCGCCCGGGGGCTCGGCGCCCAGGTGGCGTACCTGTCCCTCACCCGCGGTGAAGGGGGGCAGAACCTGATCGGCCCCGAGCTCGGCCCCGAGCTCGGCGTCATCCGCTCGGAGGAGCTGCTCGCCGCCCGGCGGATCGACGGCGCCCGCCAGTTCTTCGCCCGGGCGTACGACTTCGGGTACTCGAAGACGATCGACGAAACCCTGCGCTTCTGGCCGCGCGACTCGCTGGTCCGGGACGTGCTCGACGTGGTGCGCCGGTTTCGACCCCAGATCATCGTTTCCGTTTTCTCGGGCACGCCGAGTGACGGCCACGGCCACCACCAGCTCGCCGGCGTGCTGGCGCGCCAGGCGTTCGAGATGCTGCGCGACTCGAGCTGGGGGCCGGTGAAGCTGTACCGCTCCCTCTACGTCGATACTGCGGCCGCCACGCTCCGCCTCGACGCAGGCGCGCTCGACCCGCTCGAGGGCCGGTCGTATCACCAGATCGCCATGGCCGGTCGCAGCCAGCACCGCTCCCAGGACCAGGGGCAGCTCGAGCGCGGAGGCCCGAGCCTCGCGCGCCTGACGTTCGTCGAATGGCGGGACCGGGTGGGGGGCCGGGCGGGGGATGATGGGGGAGGGAGCGGTGTGTTCGCGGGCATCGATACGATGTTCCCCAGCGCGGCCCACTACGCCGTGCTGGTCGACTCGGCCCGGGCGCTGCTCAACCCTTCCCACCCGGGCGCCATCGTACCGCTCCTCGCGCGGGCGCTGCGGGACTTGGGCGACGCCGACGGCGAGCAGCAGGAGATGCTGCGCGGTGCGCTCGCCGCCGCGGCCGGCGTCGCGGTCGACGGCACCACGGACGACGGCATCGTCACCCCGGGCGAGCGGCTGCAGCTGGAGACGAGCGTCTGGAACGGGGGGGACGGGGCGGTCACGCTGGACGGCGTGGAGGTGAGCGCGCCGGCGGGGTGGACCGTCGAGCGCCTCGACCCCGCGACCTCCCCCGTCGCTCCCGGCAGCGTCGCGACGCGCCGCTTCGCGCTCGGCGTGGCGGCCGACGCGCCCCGCTCGCAACCCTACTTTCTGCGCCGGCCCCTTGCCGGCGCGCTGTACGATTGGACCGGCGTGCCGACCGCCTGGCGCGGGCTGCCGTTCGAGCCGCCTCCCGTCGAGGTCACGTTCCGGCTGACGATCGCCGGCGCCCAGGTCACCCTGCGCCGCGAAGTGGTGCACCGTTACCGCGACCAGGAAATCGGCGAGGTCCGGCGCCCGATCTTCGTCACCCAGCCGTTCGACGTGGCGGTGACCCCCGACCTCATCGTGTGGCCGATCGACGGTCGAGCGTCAACCGGAGGCGCCGGCCATTTTACGATCACCGTGACCAACCGCAGCACCGGTCCTGCCACCGCCCAGGTCGTCGTCGCGCCACCGGCGGGGTGGACCGGCCCAGGGCCCACGGAGCTGTCGTTTCAGCGGGAAGACGAGGCCAAGAGCCTCACGATCACGCTCGCCCCGCCGCCCAACCCGCGGCCCGGGATGCTGACGCTGCACGCCGCCGCCGTCGCCGCCGGCCGCAAGAGCGAGGGCGCCCTGGCGATCATCGACTACCCGCACATCCGACCGCGCGCGGTCGTGCATCGCTCCACGGCGGAGATTCGGGTGGCGCGGATTGCGCTTCCCGCCCTCGCGCGGGTCGGTTACGTGCGCGGGGCCTCGGACCGCGTTCCCGAGGCGCTTCAGGCAGTGGGCGTGCCGATCGAGCTGCTCGGTCCGGATACGCTCGCGCGCGGCGACCTGTCGCACTACGACGCGATCGTGATCGGCAGCCGCGCCTACGAGACCGATCCGGCGCTCGTGGCGAGCAACGGCCGGCTGCTCGATTATGCTCGCGCGGGCGGACTCGTGATCGTGCAGTACCAGCAGTATCCATTCGTCAGCGGCGGCTTCGCGCCCTATCGGCTCAGCATCGCCCGGCCGCACGACCGTGTGACGGACGAGACGGCGCCCGTCACGCCACTCGACCCTGCCCAGCGCGTCTTCCATCTGCCTAACGAAATCGTGCCTGAGGACTGGCAGGGCTGGGTACAGGAGCGGGGACTCTACTTCGCGCACGATTGGGACCCCGCGTACACGCCGCTGCTCGAGACGCACGATGCGGGGGGCCCGCCGCTCCAGGGCGGTCTGCTCGTGGCGGCGATCGGCAACGGCACGTACGTGTACACCGGGCTGAGCTTCTTCCGGCAACTCCCCGCGGGCGTCCCCGGCGCCTATCGGCTATTTGCCAATCTCCTGGCGTTGGGCAAGAAATAG
PROTEIN sequence
Length: 830
VRRTLAASLAFIIGAAGSAAGQFTPPGTGGVAALAGALKQLGANKRVLMIGAHPDDEYSDLVAFFARGLGAQVAYLSLTRGEGGQNLIGPELGPELGVIRSEELLAARRIDGARQFFARAYDFGYSKTIDETLRFWPRDSLVRDVLDVVRRFRPQIIVSVFSGTPSDGHGHHQLAGVLARQAFEMLRDSSWGPVKLYRSLYVDTAAATLRLDAGALDPLEGRSYHQIAMAGRSQHRSQDQGQLERGGPSLARLTFVEWRDRVGGRAGDDGGGSGVFAGIDTMFPSAAHYAVLVDSARALLNPSHPGAIVPLLARALRDLGDADGEQQEMLRGALAAAAGVAVDGTTDDGIVTPGERLQLETSVWNGGDGAVTLDGVEVSAPAGWTVERLDPATSPVAPGSVATRRFALGVAADAPRSQPYFLRRPLAGALYDWTGVPTAWRGLPFEPPPVEVTFRLTIAGAQVTLRREVVHRYRDQEIGEVRRPIFVTQPFDVAVTPDLIVWPIDGRASTGGAGHFTITVTNRSTGPATAQVVVAPPAGWTGPGPTELSFQREDEAKSLTITLAPPPNPRPGMLTLHAAAVAAGRKSEGALAIIDYPHIRPRAVVHRSTAEIRVARIALPALARVGYVRGASDRVPEALQAVGVPIELLGPDTLARGDLSHYDAIVIGSRAYETDPALVASNGRLLDYARAGGLVIVQYQQYPFVSGGFAPYRLSIARPHDRVTDETAPVTPLDPAQRVFHLPNEIVPEDWQGWVQERGLYFAHDWDPAYTPLLETHDAGGPPLQGGLLVAAIGNGTYVYTGLSFFRQLPAGVPGAYRLFANLLALGKK*