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13_1_40cm_scaffold_2611_5

Organism: 13_1_40CM_Deltaproteobacteria_68_24

partial RP 20 / 55 BSCG 17 / 51 MC: 1 ASCG 5 / 38
Location: comp(4291..5736)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F9G3_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 474.0
  • Bit_score: 436
  • Evalue 3.30e-119
Type IV fimbriae expression regulatory protein PilR {ECO:0000313|EMBL:EYF03411.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chon similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 473.0
  • Bit_score: 458
  • Evalue 1.20e-125
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 474.0
  • Bit_score: 436
  • Evalue 9.40e-120

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ATGGATGACCTGAATGGTCAGTCGAATGTGCCGGTCGGCTCGGCCAGCCGCACCCTTTCACGTCCCGGGCACGTCAAGCGAGCGCCCCCGCGCGGAGAAGCTTGTCTCTTCTTCGTCTTCCAAGCCGATCGGCCGCTGCTACCCGGCATGCGCTGTTCGCTGGCAAAAATCGATGAGATCGCCATTGGAAGGGGTTCCGAACGTCGCGTCACGACCGACGGCCGCCGCCTTGCCGTCGAGCTGCCGGACCTGTGGGTCTCGTCCCGCCACGCCAGGCTCAACAGGGTGCTCGGCGCTTGGGGAATCGAGGACTGCAAGTCGCGCAACGGGACGCTCGTCAACGGCGTTCCGGTCGAGCGATCGCCGCTGGCGGACGGCGATCTGATCGAGCTGGGACAGAGTTTCCTCATCTTCCGCGAAGGGGTGGCCGGCTCGGATGCTCCCGCCGTCGCCGAGGTCGACCACAGGCAAGGCGCAGCTCCCGGGCTGGCGACCCTTTCGGCAGAGCTCGCAGGAGAGTTCGAGCGCCTGCAGACGATGGCACGTTCGCGTGTTCCTGTCGTCGTCCGCGGCGAGAGCGGAACCGGGAAGGAGATGATTGCGTGGGCCCTGCATTGCCTCTCGGGCCGCACGGGAACGCTTCAGGCAGTGAATTGCGGCTCCCTGCCCTCCACGCTCGTTGAATCGGAGCTCTTCGGCTTTCGCAAAGGCGCCTTTTCCGGCGCAACCGAGGACCGTCCGGGCCTGGTGCGCAGCGCCGAAGGCGGGACGCTGTTCCTCGACGAGATCGGCGATCTGCCGCTACCGGCGCAGGCCGCGCTCCTCCGGGTTCTGCAGGAAGGCGAGGTACTGCCCGTCGGAGCGACCAGGCCGGTAAAAGTGGACTTCCGGCTGGTCGCCGCCACGCACCGCGACCTGGATGCCCTCGTCGAGAGCGACCGCTTCCGCGCCGACCTGCTCGCGCGCATCGGCGGATTCACGATCACGTTGCCTCCGCTGCGGGAACGCCGCGAGGACATCGGCCTCATCGTCGCCGAGCTTCTCCGGCGCAACCTCCGCGAGCAAGCTGCCGAAGTGGCGTTTTCCCCGAGCGCGGTACGCACATTGTTCGGTTACGCGTGGCCGTTCAACATCCGCGAGTTGGACAGATGCGTGGAAGCTGCCATCGTCCTGTCCGCGTCCGGGCCCATCGACGTTGCGCACCTACCGGCCGCTGTCACCGCGATACGCTCGCAGCGCGGCGCGCGAGAACCGCGCGCGAAAAGGGCTGAGCCGGCCCTGTCCGAGCTTGACCGCAAGAGGCGCGACGACATCATTGCCGCTCTGACCGCCAGTGGAGGCAACGTCAGCGCGGCTTCCCGGGTGCTGGGCAAGGCCCGCGCGCAGGTGCAGCGATGGATCAAGCGCTATGCCATCGATCCGCGGAGCTTCCGTCCGAGTCCCTGA
PROTEIN sequence
Length: 482
MDDLNGQSNVPVGSASRTLSRPGHVKRAPPRGEACLFFVFQADRPLLPGMRCSLAKIDEIAIGRGSERRVTTDGRRLAVELPDLWVSSRHARLNRVLGAWGIEDCKSRNGTLVNGVPVERSPLADGDLIELGQSFLIFREGVAGSDAPAVAEVDHRQGAAPGLATLSAELAGEFERLQTMARSRVPVVVRGESGTGKEMIAWALHCLSGRTGTLQAVNCGSLPSTLVESELFGFRKGAFSGATEDRPGLVRSAEGGTLFLDEIGDLPLPAQAALLRVLQEGEVLPVGATRPVKVDFRLVAATHRDLDALVESDRFRADLLARIGGFTITLPPLRERREDIGLIVAELLRRNLREQAAEVAFSPSAVRTLFGYAWPFNIRELDRCVEAAIVLSASGPIDVAHLPAAVTAIRSQRGAREPRAKRAEPALSELDRKRRDDIIAALTASGGNVSAASRVLGKARAQVQRWIKRYAIDPRSFRPSP*