ggKbase home page

13_1_40cm_scaffold_2080_5

Organism: 13_1_40CM_Chloroflexi_67_9

partial RP 16 / 55 BSCG 14 / 51 MC: 1 ASCG 5 / 38 MC: 1
Location: 3981..4523

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-28 subunit FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 179.0
  • Bit_score: 201
  • Evalue 7.30e-49
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA id=14631362 bin=bin9_gal15 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 173.0
  • Bit_score: 104
  • Evalue 1.50e-19
RNA polymerase sigma 70 similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 196.0
  • Bit_score: 86
  • Evalue 1.20e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 543
GTGGCCTCCCGATCCATCGACCCTCGCTGCCGCGGCGCGGACCGGGAGGATCTGATCGCCTGGGGTCTGGTCGGCCTCGTGCAGGCGGCCCGCCGGTATCGCGGCGATCGCGGCGCGTCGTTCGGCGCGTACGCCGCGCGGCGCGTGCGCGGGCAGATCCTCGACGCCCTCCGCGAGCGCGACCCGCTCACCCGGAGCGCGCGCCGCGCCTTCCGGGCGGCACAGCGGGCTAGCGACGATCGCGATGGGGGCTCATCCCCCACCCCACCGCCGTACGTCGAAGTCTCGCTCGACCGGCTCGGCGATGTGGCCGAGGCGCACCGCGCCCCGGAACGTCGCGATGAACGCTGGCCGCAGGTCGCGAGCGCGCTTCGCGACCTCACTCCGCTCGAGCGTCGCGTCCTCGTGCTGTCGTACGGCCGAGGATTGACCCTGCGAGAGATCGGCAGCGAGGTCGGTCTCTCCGAGTCGGGCGTGTGCCGTCTGCGAGCGTGTCTGATCTCCGCCGCGCGCGGTTCGCACGACTGGTGCGCAACGCTCTAA
PROTEIN sequence
Length: 181
VASRSIDPRCRGADREDLIAWGLVGLVQAARRYRGDRGASFGAYAARRVRGQILDALRERDPLTRSARRAFRAAQRASDDRDGGSSPTPPPYVEVSLDRLGDVAEAHRAPERRDERWPQVASALRDLTPLERRVLVLSYGRGLTLREIGSEVGLSESGVCRLRACLISAARGSHDWCATL*