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13_1_40cm_scaffold_30562_6

Organism: 13_1_40CM_Gemmatimonadetes_66_11

partial RP 4 / 55 MC: 2 BSCG 11 / 51 MC: 1 ASCG 8 / 38 MC: 2
Location: 4137..5864

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 596.0
  • Bit_score: 534
  • Evalue 2.60e-148
ABC transporter, ATP-binding protein, MsbA family n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A1A6_MELRP similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 614.0
  • Bit_score: 442
  • Evalue 7.30e-121
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 604.0
  • Bit_score: 446
  • Evalue 1.40e-122

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1728
ATGAGCAGCGCCAAAGGCGGCGCGCGGCTGCTGTCGCTCCTGCGACCTTACTCGTTGCTGTTCGCCGCCACGATCGCTGCGACAGTCATCTCGTCGGTGCTCGACGGCTTCACGTTCGTCCTGCTGATCCCGTTCCTGCGCACGCTGTTCGGCAATGCGGCGCTGCCGGCGCAGGGCGGCTCGCAGGTCGAGACGGTACTCAACAAGATCGCGGGACCCTTCCTCCAGGCCGGCACGCCGGAGCTCGCGCTCCGTAACGTCGTGATCGTGCTGCTGGTGGCACTGCTGCTCAAGAACCTCACCTCATATCTCGCGTCGCTCGGCAGCGTCTCGATTCAGGAAGGCGTCGTCCGCGATTTGCGCATTCGTCTGTTCCGGCACCTGCAAACCCTGCCGCTCGGTTACTTCCAGCGCACGCGCGCCGGCCAGACGATCGCACGGGTGATCAGCGACACCGATCAGGTGAAGACTGCCGTGAGCGCGTCGCTGGCGTCGCTGCTGCAAAACGTCGTCGTCATCATCGTCTACATCGTGATTCTCTTCGGCCTCTCGGTCAAACTCGCGTTGCTCTCGCTGCTGCTCGCGCCGGTGCTGTTGCTCATCATCCGTCCGATGATCAATCGCCTGCGCCGTCGCTCACGCGAGCTGGCCGCCGAGCGGGGTGAGGTCACGAGCCACGTGGGCGAGATGATCGCATCGGCAAAACTGGTGCGCGCGTACGTGGCCGAAGCGTTCGAGTTGGGGCGGTTCCGGGGCGTGATGATCGTCCTGATCCTGGTCGTCGGGACCCGTCTCGCGCTTGGCACCGCGGCGAGCCTCGATCCCGCCGTGCTGATCACCTTCCTCGCCGTCAGTCTGCGACTGATGTCGCCGATCAAGTCGGTGTCGAACTATCCTGCGATCATGGCCACAGCCGTCGCATCCGCGGAGCGGGTGTTCGAGGTCCTCGACTTGCCATCCGCCGAAGTCGACCGTCCGGGCGAGACGACGGCGGAGTTCAGCGAGCGCATCGAGTTCCGCGGCGTCTCGTTCGAGTACGAGCCCTCCGAATCGGTGCTGCGCGACGTGGATCTCGACGTGGAGCGCGGTCAGGTCGTCGCGATCGTCGGCCCGTCGGGAGCGGGGAAGACCACGCTGGTCGATCTGCTGCCGCGATTCTATGAGCCCACGCGCGGTGAGATCCTGCTGGACGGCGTGCCCCTGACCAGCTACACGCGCACGTCGCTGCGGCGCCTCATGGGGATCGTGTCGCAGGAAACGGTGCTGCTCAACGACACCGTGTTGGCGAACATCGCCTACGGACTGAAAGACGTGCCGCTCGAGCGGGTGCGGGACGCCGCGCGCGCCGCGAACGCCGACGAGTTCATCATGCGGCTGCCCGAAGGCTACAGCACGGTGCTCGGCGAGCGCGGCACCCGGCTCAGCGGCGGGCAGCGCCAACGCATCGCGATCGCTCGGGCGTTGTTGCGCGATCCACCGATTCTGATCCTGGACGAAGCCACCAGCGCACTCGACACCGAGTCCGAGCGCCTCGTGCAGGAGGCGATCGACCGGCTGATGGCACATCGCACCGTGTTCGTGATTGCCCACCGGCTCGCTACGGTGCAGCATGCCGACTTCATCGTCGTGTTGGCGGAAGGGCGGATCGTCGAGCGCGGCACTCATGCCGACCTGCTCTCGAGTGACGGCCTGTATCGCCGTCTGTATAACCTGCAGTTCCGGACCTGA
PROTEIN sequence
Length: 576
MSSAKGGARLLSLLRPYSLLFAATIAATVISSVLDGFTFVLLIPFLRTLFGNAALPAQGGSQVETVLNKIAGPFLQAGTPELALRNVVIVLLVALLLKNLTSYLASLGSVSIQEGVVRDLRIRLFRHLQTLPLGYFQRTRAGQTIARVISDTDQVKTAVSASLASLLQNVVVIIVYIVILFGLSVKLALLSLLLAPVLLLIIRPMINRLRRRSRELAAERGEVTSHVGEMIASAKLVRAYVAEAFELGRFRGVMIVLILVVGTRLALGTAASLDPAVLITFLAVSLRLMSPIKSVSNYPAIMATAVASAERVFEVLDLPSAEVDRPGETTAEFSERIEFRGVSFEYEPSESVLRDVDLDVERGQVVAIVGPSGAGKTTLVDLLPRFYEPTRGEILLDGVPLTSYTRTSLRRLMGIVSQETVLLNDTVLANIAYGLKDVPLERVRDAARAANADEFIMRLPEGYSTVLGERGTRLSGGQRQRIAIARALLRDPPILILDEATSALDTESERLVQEAIDRLMAHRTVFVIAHRLATVQHADFIVVLAEGRIVERGTHADLLSSDGLYRRLYNLQFRT*