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13_1_40cm_scaffold_3450_15

Organism: 13_1_40CM_Gemmatimonadetes_66_11

partial RP 4 / 55 MC: 2 BSCG 11 / 51 MC: 1 ASCG 8 / 38 MC: 2
Location: 15233..15601

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 123.0
  • Bit_score: 153
  • Evalue 1.60e-34
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A885_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 123.0
  • Bit_score: 140
  • Evalue 1.30e-30
pseudouridine synthase, RluA family similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 123.0
  • Bit_score: 144
  • Evalue 1.90e-32

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 369
GTGCATCGCCTCGACCGCGATACGTCCGGGCTGCTCATCGTCGCCAAGAGCGACCTGGCGCACCGACGGCTGGCGGGCGCCATCGAGCGCCGCGCCGTGAAGCGGGTATACGCCGCGGTGGTGTGGGGCCATCTGCGCAAGCATGTGGTGGACATCGAAGCGCCGATCGCGCGCAATCCCAAAGACCGCAAACGCATGACCGTTGCCGAAGGCGGCCGGCATGCCACGACACACGCCGCCGTCGTCGCGCGCTTCGCCCACGCCGACCTGCTGCGCGTGCGACTCGGCACCGGACGTACCCATCAGATCCGCGTCCACCTCGCGCACGTCGGCTGCCCGATCGTCGGGGACCGCGAGTACACGTTCGGC
PROTEIN sequence
Length: 123
VHRLDRDTSGLLIVAKSDLAHRRLAGAIERRAVKRVYAAVVWGHLRKHVVDIEAPIARNPKDRKRMTVAEGGRHATTHAAVVARFAHADLLRVRLGTGRTHQIRVHLAHVGCPIVGDREYTFG