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13_1_40cm_scaffold_9618_5

Organism: 13_1_40CM_Gemmatimonadetes_66_11

partial RP 4 / 55 MC: 2 BSCG 11 / 51 MC: 1 ASCG 8 / 38 MC: 2
Location: 4963..5292

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 112.0
  • Bit_score: 94
  • Evalue 5.40e-17
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 98.0
  • Bit_score: 106
  • Evalue 3.30e-20
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 112.0
  • Bit_score: 94
  • Evalue 1.50e-17

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 330
ATGGCGCGTGACGAGGCCCGCCGGGCCGCGCGGGAGAAGCGGCATCTGACGCTACTCAAGAGCGAGCCGGATGCCGTTCACACCGTCCCGGAAGACCAGATCGACGCCGACACACAGCAGACGCGGGTGCGCGCGGCACTCGACCAGCTCACCCCGCGCGATCGCGAAGCGCTGCTCTTGTGGGATGCAGGAATGTCGTATGACGAAATCGCCGCGCAGACCGGGCTGGCGCGCGGCGCGATTGGAACGACGCTGGCGCGGGCGCGCCGGAGATTAGTCGAGGCCTATGATGCGGGACAGGAAGGAGGACAGCATGTCGCACGTGGATGA
PROTEIN sequence
Length: 110
MARDEARRAAREKRHLTLLKSEPDAVHTVPEDQIDADTQQTRVRAALDQLTPRDREALLLWDAGMSYDEIAAQTGLARGAIGTTLARARRRLVEAYDAGQEGGQHVARG*