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13_1_40cm_scaffold_1285_2

Organism: 13_1_40CM_Gemmatimonadetes_70_11

partial RP 14 / 55 MC: 2 BSCG 16 / 51 MC: 3 ASCG 7 / 38
Location: 716..1921

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 402.0
  • Bit_score: 544
  • Evalue 9.50e-152
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 384.0
  • Bit_score: 626
  • Evalue 3.50e-176
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 404.0
  • Bit_score: 559
  • Evalue 6.20e-157

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1206
ATGCCGGTTTACGAATACTCCGCCCGCAACCTCAAGGGCGATCTCGTCAAGGACAAGATCGACCTCCCGTCCCGCGACGACGTCATCGCCCACCTGCGCAAGAACCGCCTCGTGGTGGTGCAGGTCCGCGAGGCGCCCAAGGAAATCAGCTTGAGTGCGCTCTTCAAGCCCGGCATCAAGACCCGCGACATCGTGATCTTCACGCGCCAGTTCGCCACCATGATCAACTCGGGCTTGCCCCTGGTGCAGGCCCTCGACATCCTCTCCCAACAGACGGAAAACAAGGCCCTAGCCGACGTCACCCGGGCGGTAGTCTACGACGTCGAAAGCGGCCACACCCTGGCCGATGCCCTGCGCAAGCACCCCAAAGCGTTCACCGATCTGTTCGTCAACATGGTCGCCGCGGGCGAGGCCGGCGGCATCCTCGACACCATCCTGCTGCGCTTGGCGGAGTTTCTCGAGAAAAACGACCTCATCGTACGCAAGGTGAAAGGCGCGATGATCTACCCCGCGGTCATCTTCAGCGTGGCCGCGATCGCCGTGGCGACGCTGCTCATCTTCGTCATCCCCACGTTCCAGAAGATGTTCGCGTCGGTCAACCTGCTGCTGCCGCTCCCGACCCGCATCGTCATCGGCGCCAGTTACCTCCTGGCCCACTACTGGTGGGCGATCTTCGGCGTGATCGGGTTCACCGTCTTCGCCATCAACCGCTACTACAAGACTCCCCCGGGCAAGCTGCAGATCGACTCCTTGTTGCTGAAGCTGCCCGTGCTGGGCGATCTGCTACGCAAGTCGGCCGTGTCACGCTTCACGCGCACGCTGGGCACGCTGATCTCCTCGGGCGTATCGATTCTCGACGGCCTCGAGATCACCGCCCGCACCGCCGGCAACCAGGTGATCCACAACGCGGTCATGGAGTCCCGCGCCTCGATCGCGGGCGGCGAGACCATCTCCGGCCCGCTGCAGAAGTCCAAGGTGTTCCCGCCGATGGTGATCTCGATGATCGCCGTCGGCGAGCAAACCGGCGGGCTCGACGAGATGCTTTCCAAGATCGCCGACTTCTACGACGACGAGGTGGACGCCGCGGTGAGCGCCCTGCTCTCCATTATGGAACCGATCATGATCGTCGTGCTGGGCGTCATCGTCGGCGGCATGGTGGTCGCCATGTACCTGCCCATCTTCGACATGGTGAACGCGGTGCAGTAA
PROTEIN sequence
Length: 402
MPVYEYSARNLKGDLVKDKIDLPSRDDVIAHLRKNRLVVVQVREAPKEISLSALFKPGIKTRDIVIFTRQFATMINSGLPLVQALDILSQQTENKALADVTRAVVYDVESGHTLADALRKHPKAFTDLFVNMVAAGEAGGILDTILLRLAEFLEKNDLIVRKVKGAMIYPAVIFSVAAIAVATLLIFVIPTFQKMFASVNLLLPLPTRIVIGASYLLAHYWWAIFGVIGFTVFAINRYYKTPPGKLQIDSLLLKLPVLGDLLRKSAVSRFTRTLGTLISSGVSILDGLEITARTAGNQVIHNAVMESRASIAGGETISGPLQKSKVFPPMVISMIAVGEQTGGLDEMLSKIADFYDDEVDAAVSALLSIMEPIMIVVLGVIVGGMVVAMYLPIFDMVNAVQ*