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13_1_40cm_scaffold_22017_15

Organism: 13_1_40CM_Gemmatimonadetes_70_11

partial RP 14 / 55 MC: 2 BSCG 16 / 51 MC: 3 ASCG 7 / 38
Location: 12116..13354

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 411.0
  • Bit_score: 426
  • Evalue 6.40e-117
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 410.0
  • Bit_score: 460
  • Evalue 1.40e-126
2-isopropylmalate synthase Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 414.0
  • Bit_score: 618
  • Evalue 5.70e-174

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1239
ATGGACGAGCGCGAGCTGATCTACGACTGGAACCAGAGGGTGGGGCAAGGGGCCTTCGACTGGACCCGCGCTCGCGTCGACCTGAACGACGAGACGCTGCGCGACGGTCTGCAGTCTCCCTCGGTCCGCGACCCCTCGCTCGAGGTCAAAAAGCGGCTCCTGCACCTGATGGCCGACCTCGGCATCGTGGCGGCGGACATCGGGCTCCCGGGGGCCGGGCCGCGGGTGGTGGAACAGGTGCGAGTGCTGGCCCAGGAGATCCGCGACCATAAGCTGCCGATCTTCCCGAATTGCGCCGCCCGGACGGTGATCGCCGACGTAGAGCCGGTCGTGCGCATCGCGGAGGAGGTGGGGATCCGGATCGAGGCGGCGACGTTCATCGGCTCCTCCCCGATCCGCCAGTACGCTGAAGACTGGACCGTCGAGCGGATTCTCCGCTCCAGCGAGGAGGCGGTGACCTTCGCGGTCCGACACGGCCTGCCCGTCATGTACGTCACCGAGGACACGACGCGGGCGCGGCCGGAGACGTTGAAGCGTCTGTACGGCGCGGCCATCGACTGCGGGGCCACGCGCATATGCCTGGCCGACACGGTCGGGCACGCGACGCCGGATGGAGTGAAGGCGCTCGTCAGCTTCGTAAAGAAAGAAATCGTCGGGAACAAAGACGTACAGATAGACTGGCATGGTCACCGGGACAGAGGGATGGGACTGATCAACTGCCTGGCGGCCATCGAGGCGGGGGTGGACCGCGTGCACGCCACCGCGCTCGGCGTGGGAGAACGGGTGGGGAACGCCGAGATGGACCTGCTGATCGTGAACCTTAAGTTGCTCGGCACTTACCGGCACGATTTGTCCAAGCTCCCCGAGTACTGCCGCACCGTGGCGGACGCGGTGGGCATTCCGATCCCCATCAACTATCCCGTCCTGGGCGCCGACGCGTTCCGCACGGGCACCGGCGTCCATGCGGCGGCGATCATCAAGGCGAAGAAGAAAGGCCACGCCTGGCTCGCCGACCGGGTCTACAGCTCGGTGCCGGCGGAGGAGCTCGGGCTCGAGCAGAAAATCGAGATCTCGCCCGTGTCGGGCCTCTCGAACGTGAAGTTCTGGCTGCAGACGCACGGGTATGACGGCGACGACGAAGCGGCCTGCAAGGCGCTGTTCGAGGCGGCGAAGCGGACCGATCGCGTGCTCACCGATGAGGAGTGCCACCGGCTCTTGAAACAGGCCGCATGGCGGTAG
PROTEIN sequence
Length: 413
MDERELIYDWNQRVGQGAFDWTRARVDLNDETLRDGLQSPSVRDPSLEVKKRLLHLMADLGIVAADIGLPGAGPRVVEQVRVLAQEIRDHKLPIFPNCAARTVIADVEPVVRIAEEVGIRIEAATFIGSSPIRQYAEDWTVERILRSSEEAVTFAVRHGLPVMYVTEDTTRARPETLKRLYGAAIDCGATRICLADTVGHATPDGVKALVSFVKKEIVGNKDVQIDWHGHRDRGMGLINCLAAIEAGVDRVHATALGVGERVGNAEMDLLIVNLKLLGTYRHDLSKLPEYCRTVADAVGIPIPINYPVLGADAFRTGTGVHAAAIIKAKKKGHAWLADRVYSSVPAEELGLEQKIEISPVSGLSNVKFWLQTHGYDGDDEAACKALFEAAKRTDRVLTDEECHRLLKQAAWR*