ggKbase home page

13_1_40cm_scaffold_5931_10

Organism: 13_1_40CM_Gemmatimonadetes_70_11

partial RP 14 / 55 MC: 2 BSCG 16 / 51 MC: 3 ASCG 7 / 38
Location: comp(10166..11629)

Top 3 Functional Annotations

Value Algorithm Source
glcD; glycolate oxidase subunit GlcD; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 465.0
  • Bit_score: 661
  • Evalue 6.90e-187
Glycolate oxidase subunit GlcD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y2_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 462.0
  • Bit_score: 562
  • Evalue 3.10e-157
glcD; glycolate oxidase subunit GlcD similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 462.0
  • Bit_score: 562
  • Evalue 8.80e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1464
ATGAGCGCGACCAACGGCGGAGGGGGCGGCGGCGAGAGCAGGGGATCGCTGGTGGCGGCGCTGGCCGCCATTGTGGGGCCCGGTCACGTCCGGACGGCCACGGCCGAGCGGGCTGCCTACGCGATGGATGGCCTGCCGACGCACCGCCGCGTCCCCGGCGTCGTGGTGCTGCCGGGGACGCGGGAGGAAGTGATCGCGGTCGTGCGGCTGCTCGCCGCGCGGGGGGTGGCGTTCGTGCCGCGCGGCGCGGGCACGGGGCTCTCCGGGGGCGCACTCGCCGCGCCGGAAGCGGTGCTCCTCGTGCTCACGCGCCTGAACCGCATCCTCACCATCGATCCGGCCAACCGCTGCGCGGTGGTGGAGCCCGGCGTCGTGAACGTGAAGCTCTCGGCGGCCGCCGCCCCGCACGGGCTGCTCTACGCTCCCGACCCGTCCAGCCAGACCGCCTGCACCATCGGAGGCAACGTGGCCGAGAACTCCGGCGGGCCCCATTGCCTCAAGTACGGCGTGACCAGCAACCACATCCTCGCCCTCGAGGTCGTGCTCGCAGACGGCCGCAGCGTCACGCTCGGCAGTCCGGGAGGGGAGCCGTGGGGGCCGGACCTCGTCGGGGTGTTCGTCGGCTCGGAGGGCAACTTCGGCATTGCCACGCGGATCACCGTGCGGCTCATCCCGGTGCCGCGCGCCGTGCGGACCTTGCTCGCCGACTTTCCGTCCCTCCGCGGTGCGGGCGAGGCCGTTTCGGCGATCATCGCCAGCGGAGCGGTCCCGGCCGCATTGGAGATGATGGACCAATCCTGCATTCGGGCGGTCGAGGACTCGGTGTACGCGGCGGGCTACCCGCGGGACGCCGCGGCGGTGCTGCTGGTGGAGCTCGACGGCCGCAGCGACGGAGCCGTCGACGAGGAGGCGGAAGCCGTCGCGGGCCTGCTCGGCTCGCACGGGGCCCGCACGGTGCGGCGCGCGGCGGATGCGCGCGAGCGGGAGCGGCTGTGGCAGGGCCGCAAGAAGGCGTTCGGCGCCATGGGCCGGCTGTCCCGGGACCTCGTGGTCCAGGACGCCGTGGTGCCGCGCTCGGCGCTGCCCGAGGTCCTGGAGACGATCGGCCGCATCGCCGCCCAGCACCGCCTCGTGGTCAGCAACGTGTTCCATGCGGGCGACGGCAACCTGCATCCCAACATCTCCTTCGACGGCAGCGACACGGCGCAGCGCACGCACGTCGAGCAGGCGAGCGCGGAGATCATGGGAGCGTGCATCGCGGCCGGCGGCACGATCACGGGAGAGCACGGCGTGGGGCTGGACAAGCTCCGGTACATGCCGCTCATCTTCGATGCCGATTCACTCAGCGCGATGCACGCCGTTCGACGGGTATTCGACCCGGACGAGCGGGTGAACCCGGGCAAGGTGGTTCCGGTACACGCGTGCCGGGAATGGAGCGGAACGACCAGGCGGGGCTCCCCATGA
PROTEIN sequence
Length: 488
MSATNGGGGGGESRGSLVAALAAIVGPGHVRTATAERAAYAMDGLPTHRRVPGVVVLPGTREEVIAVVRLLAARGVAFVPRGAGTGLSGGALAAPEAVLLVLTRLNRILTIDPANRCAVVEPGVVNVKLSAAAAPHGLLYAPDPSSQTACTIGGNVAENSGGPHCLKYGVTSNHILALEVVLADGRSVTLGSPGGEPWGPDLVGVFVGSEGNFGIATRITVRLIPVPRAVRTLLADFPSLRGAGEAVSAIIASGAVPAALEMMDQSCIRAVEDSVYAAGYPRDAAAVLLVELDGRSDGAVDEEAEAVAGLLGSHGARTVRRAADARERERLWQGRKKAFGAMGRLSRDLVVQDAVVPRSALPEVLETIGRIAAQHRLVVSNVFHAGDGNLHPNISFDGSDTAQRTHVEQASAEIMGACIAAGGTITGEHGVGLDKLRYMPLIFDADSLSAMHAVRRVFDPDERVNPGKVVPVHACREWSGTTRRGSP*