ggKbase home page

13_1_40cm_scaffold_2237_10

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: comp(11814..13481)

Top 3 Functional Annotations

Value Algorithm Source
Patatin n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0H9_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 376.0
  • Bit_score: 457
  • Evalue 1.60e-125
patatin; K07001 NTE family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 383.0
  • Bit_score: 557
  • Evalue 2.10e-155
patatin similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 376.0
  • Bit_score: 457
  • Evalue 4.60e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1668
ATGTGCGGCATTGGCGAGATCCCAATGAAAATCGCGATGGATGGCCGGATGGTCGAAGTCCACAAGCGCCGCGTCGAGGCGACCGATTGCCCGACCGAGGTTGTCGAGCAGCGCCGGCGTGCGCGCGCCAGCCTTTGCCAGCGGGACGCCCGGAAGGTACGTGACGAGACGCACGAGGTGACTGCCGCCCGTTGCGATGCCAATCGTGTCGCCCGTGATCGTCGGCAGCACGCGCGGGCAGAACGCTACACGGCCCGCCACATGCGCCATCGCGGCGTTCTGAGCCTCGAGCATCGCGCGATCCTCGGCGGCGTTCGCGACCTTGAGCACGTAACGCTCGCCCGCGGTGGTCGTGAGCAGGAAGTTCTGATCGCGCTCGCTCGGAAGTGCCGAGGTGGAAACCTCGACGCCGTACATCTCGCGCACGAGATGCACGGCCTCGGCGAGATCGTACCGCGGCGCCTGCTTCAACAGCGACATGGGCGGATTATTATCTCTTGCAGCATGGGCGAACCCACTCACCGGTCCGATCTGGCTCTCGTGCTCAGCGGGGGCGGCGCGCGCGCCGCGTATCAGGTCGGCTTTCTCCGCCTCCTCGCGCGGGAGTTCCCGCAGATAGTCCCGGGGATCCTGACCGGCGTGTCTGCTGGCGGGCTCAACGCGGCGAGCCTGGCGGCGCGGCACGAGCCGTTCGGCGAACGGATCGAAATGCTCGCGAGCACCTGGGCCAGCCTCCGCATGGAGGACGTGTTCCGGGTCGATCTGCGCGATCTGGCGTCGCGCACGGTCCGGTGGGGCGGACGGTTGATGTCGGGCGGCACGTCGCCGCTGCTGCCGGCAAAGAGCCTGGTCGACACCACGCCGCTTCGCGCGCTGCTCGAACGCGTCCTCGAGGCAAACGACGGCGTGCTCACGGGGATTCCTCGGAACCTGCAGACCGGCTCGTTGCGCGCGATCGCGCTGACGGCGTCCGACTACACCACGGGCCAGTCGATCACCTGGGTGCAGACGCGGGAGGACTGCCGTATCCAGACGTGGGAGCGGCCGCAGCGCAAGAGCTACACCTGCGCGCTGCGCGTCGATCACGTGATGGCCTCGTCGGCCCTTCCGTTCTTTTTTCCGGCCATCAACGTCGACGGCGAGTGGTACGGCGACGGCGGCATCCAGCTGACGGCGCCGCTGTCGCCCGCGGTCCATCTCGGCGCGAGGCAGATCATCGCGGTGTCGACGCGCTACGCCCGATCGCGCGAGGAAGCGGACCGCCCCGCCGTCGCCGGTTATCCGCCACCGGCGCAGGTGGCCGGCGTTCTGCTCAACGCGGTTTTTCTGGATCTGCTCGACACCGACGCGCTGCACATGCAGCAGATCAATGACCTGGTCGCACGACTGCCGGAAGGGCAGCGCGATGGTCTGCGGCACATCGATCTCCTCGTCCTGCGGCCGTCGGAGGATCTGGGCCGGCTGGCAAACGAATACGAGCCCGAGCTGCCGCGCGCATTCCGGTTTCTGACGCGTGGCCTCGGCACGCGCGAGACCCGGTCGAACGACCTGCTCAGCCTCGTCATGTTCCAGAGCGACTACATCAAGCGGCTCATCGAGATGGGCGAGGCAGACGCGGCGGCGAAGATCTCCGAGATCAGGCGCTTCCTCGGACACGGAGCAGGATGA
PROTEIN sequence
Length: 556
MCGIGEIPMKIAMDGRMVEVHKRRVEATDCPTEVVEQRRRARASLCQRDARKVRDETHEVTAARCDANRVARDRRQHARAERYTARHMRHRGVLSLEHRAILGGVRDLEHVTLARGGREQEVLIALARKCRGGNLDAVHLAHEMHGLGEIVPRRLLQQRHGRIIISCSMGEPTHRSDLALVLSGGGARAAYQVGFLRLLAREFPQIVPGILTGVSAGGLNAASLAARHEPFGERIEMLASTWASLRMEDVFRVDLRDLASRTVRWGGRLMSGGTSPLLPAKSLVDTTPLRALLERVLEANDGVLTGIPRNLQTGSLRAIALTASDYTTGQSITWVQTREDCRIQTWERPQRKSYTCALRVDHVMASSALPFFFPAINVDGEWYGDGGIQLTAPLSPAVHLGARQIIAVSTRYARSREEADRPAVAGYPPPAQVAGVLLNAVFLDLLDTDALHMQQINDLVARLPEGQRDGLRHIDLLVLRPSEDLGRLANEYEPELPRAFRFLTRGLGTRETRSNDLLSLVMFQSDYIKRLIEMGEADAAAKISEIRRFLGHGAG*