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13_1_40cm_scaffold_331_22

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: comp(21920..22663)

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 249.0
  • Bit_score: 364
  • Evalue 1.20e-97
Pseudouridine synthase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HKC7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 254.0
  • Bit_score: 167
  • Evalue 1.90e-38
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 244.0
  • Bit_score: 159
  • Evalue 1.10e-36

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGGATCGGCCCGGCACGGCGAAGCGCCGCGCCACGCTCGGCGACGAACGCGACCTGCCGATCCTCTACGAAGACGACGCGCTCATCGTGCTGAACAAACCGGCAGGCGTGCTCGCGGTGCCGCTCGAGCGGCGCGAGGGCGCGCGATCGGTGTTCGAAGATCTGAAGGCCTATCTGAAAACGCGGCGCAAGCCGCGACCGTTCGTCGTCCATCGCATCGACCGCGACACGTCCGGCCTCGTCGTCTTCGCGAAGACCGCGGCGTCGCAGGCGCAGCTCAAGGAACAGTTCAAGCGTCACCGCGCCGAGCGCGTGTATCGCGCGCTCGTGTACGGGCAGCCGAATCCCGCGTCCGGGACATGGCGCGATCGCCTCGTGTGGGATACGAAGGCACTGATTCAGAAGGAAACGCATCCGCGGGATCCGCGCGGCAAGGACGCGATCTGTCACTACCGCCTCGTCGAGCCGCTGGGACGCGCGTCGCTCATCGAGGTGACGCTCGTCACGGGACGGCGAAATCAGATCCGCATCCAGGCGCGCTTACGCGGCCACACGCTGGTCGGCGAGCAGCGCTACACGTACGGGCCCGACACGCTGCGTCCCATCGCATTTCCGCGTCAGGCGCTGCACGCCTTCCGGCTGACGTTCTTGCATCCTGCTGACGGCCGCGAGCTGCGCTTCGAAGCGCCGCTCCCGGACGACATGAACCGCCTCGTCGCGCAGCTGCGCCGCAGCCACGGGTAA
PROTEIN sequence
Length: 248
MDRPGTAKRRATLGDERDLPILYEDDALIVLNKPAGVLAVPLERREGARSVFEDLKAYLKTRRKPRPFVVHRIDRDTSGLVVFAKTAASQAQLKEQFKRHRAERVYRALVYGQPNPASGTWRDRLVWDTKALIQKETHPRDPRGKDAICHYRLVEPLGRASLIEVTLVTGRRNQIRIQARLRGHTLVGEQRYTYGPDTLRPIAFPRQALHAFRLTFLHPADGRELRFEAPLPDDMNRLVAQLRRSHG*