ggKbase home page

13_1_40cm_scaffold_491_1

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: comp(3..314)

Top 3 Functional Annotations

Value Algorithm Source
type II and III secretion system protein; K02453 general secretion pathway protein D Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 104.0
  • Bit_score: 139
  • Evalue 2.60e-30
type II secretory pathway, component PulD id=12554092 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 97.0
  • Bit_score: 84
  • Evalue 6.90e-14
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 101.0
  • Bit_score: 77
  • Evalue 1.80e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGACGACACGGCTGAAGCAGCTCGGCGTGGTGTTCGCACTGGCGCTGGTCGTGGGAGGCTGCGCCGCGGGGAAGGCCTTCCGGCAGGGCGAGAACGCCGCGCGCGCGGGCAATCTGGACGAAGCCGTGGCTGCGTACCGCCGCGCCGCACAGGCCGCGCCCGACAATGCGAATTACCGAATCGCGCTCGAGCGCGCGATGCAGGCGGCGTCGCGCGCGCACCTCGAGAAGGCGCGCGAGTTCGAGCAGAAGGATCAGCTCGAGGCCGCGCTCGGCGAATATCGTGCCGCGAGCGAGTACGACCCGAGCAAT
PROTEIN sequence
Length: 104
MTTRLKQLGVVFALALVVGGCAAGKAFRQGENAARAGNLDEAVAAYRRAAQAAPDNANYRIALERAMQAASRAHLEKAREFEQKDQLEAALGEYRAASEYDPSN