ggKbase home page

13_1_40cm_scaffold_539_2

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: comp(469..855)

Top 3 Functional Annotations

Value Algorithm Source
TfoX domain-containing protein; K07343 DNA transformation protein and related proteins Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 119.0
  • Bit_score: 158
  • Evalue 6.60e-36
Regulator of competence-specific genes id=1880626 bin=GWD2_Nitrospirae-related_57_8 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 106.0
  • Bit_score: 119
  • Evalue 3.20e-24
competence-specific genes regulator similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 111.0
  • Bit_score: 117
  • Evalue 3.40e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 387
GTGCCTCGTACGCGCGCCCGCGGCAGTCCACGCAAAGCGTCGCTCCGCTCGCTCGCGGTCAGCGACGCGTTCAAGTCGTACGTGCTCGATCAGCTCGACGATCTCGGCGATGTCGTGCCGCGGTCGATGTTCGGGGGCGTCGGACTCTACTCGCGAGGCGTGTTTTTCGGGATCATCGCGCGCGACATGCTATATCTGAAAGTCGACGAAACCACCCGGGCCGACTACGAGGGAGCGGGGATGAGGCCGTTCAAGCCGTATCCGGATCGCGCGGGCACGATGCAGTACTACGCTGTGCCCGTCGGCGTCCTGGAAGCCTCGGAAGATCTCGTCGCGTGGGCGCGGAAAGCGGTGGCCGTGGCGAAGCGGGCTACACCGCGAGCTTGA
PROTEIN sequence
Length: 129
VPRTRARGSPRKASLRSLAVSDAFKSYVLDQLDDLGDVVPRSMFGGVGLYSRGVFFGIIARDMLYLKVDETTRADYEGAGMRPFKPYPDRAGTMQYYAVPVGVLEASEDLVAWARKAVAVAKRATPRA*