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13_1_40cm_scaffold_6196_1

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: comp(207..1925)

Top 3 Functional Annotations

Value Algorithm Source
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 572.0
  • Bit_score: 1005
  • Evalue 3.90e-290
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor id=12556622 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 570.0
  • Bit_score: 840
  • Evalue 1.20e-240
sigma 38, RpoS similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 580.0
  • Bit_score: 716
  • Evalue 7.30e-204

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
TTGTCGATCGAAGAAAAGTATGACGAAGTCAGGCAGCTGATTAACATCGGCAAGGAAAAAGGCTACCTGCTGTACGACGAGGTCAACGAGCTGCTCCCGTCGGAAATCACCTCCTCCGACGAGCTCGACGACCTCTTCAACACCTTCGGCAGCGCGGGCATCGAGGTCATCGACTCCGACCAGAAGTACCTGCGCGACGACGTCAAGCCGATCGACCGGACCCAGGAAGGCGCCGAAGAGCTCGAGCTCGACCTCACGCCGGGCGCGCTCGACAAGACCAACGACCCGGTCCGCATGTACCTGCGCGAGATGGGCACGGTGCCGCTGCTCACGCGCGAAGGCGAGGTCGAGATCGCGCGGCGCATCGAGCGCGGGAAGCTCGCCGTCATCAAGTCGATTTCGCGGACGCCGCTCATCTCCAAGAAGGTGATCCTCCTCGGCGATCAGCTGCACACCGGCGAGCGCACGATCCGCGAGCTGGTCATCTTCAACGACGAAGAGATCACCGACGAGCGGATCGTCGAGCGCTCCAGGCAGGTGCAGAAGCAGATCGACGCGGTGCGCAAGGCGCGCGCCGCGTACGAGAAGCTCGAAGAGAAGCTTGCCGAGACGCCGAAGGGCACGACGACGCGCGACAAGCGGAAGTACCGCCGCTGCCGGTGGCACGCCATGCGCGCGCAGGTGGAGCTGTCGCAGGCGATCCGCCGGATCGAGTTCACCGAAGCGGTCAAGCGGCGCCTCATCGACGAGATGAAGGATGCGGTCGAGAGCGTTCGCTCGGTGCAGCGCGAGGTCGAGGCCAACGAGCGGCAGCTCAATCCCAAGAACAAGAAGATCAAGCTGAAGGAAGAAGACAAGAAGAACATCCAGCGGCAGATCAAAGAGCTGCGCCTGAAGATCAAGGGCATCACCGACGTCCTCGAACAGTCGCCCGACGAGCTCAAGCAAACGCTGGACGTCATCCTTCGCGGCGAGTACCAGGCCGAGCAGGCGAAGAAGGAGCTGGTCGAAGCCAACCTCCGCCTCGTCGTCTCGATTGCGAAGAAGTACACGAACCGCGGCTTGCAGTTCCTCGATCTGATTCAGGAAGGCAACATCGGCCTGATGAAGGCGGTGGACAAGTTCGAGTACCGGCGCGGCTACAAGTTCTCGACGTACGCGACGTGGTGGATCCGCCAGGCGATCACCCGCGCGATTGCCGACCAGGCGCGGACCATCCGCATCCCGGTCCACATGATCGAGACGATCAACAAGCTCATTCGTACGTCGCGCGCGCTCGTGCAGGAGCTCGGCCGCGAGCCGACCTCCGAAGAGATCGCGAAGCGGATGGATATTCCTGTGTCAAAGGTCCGCAAGGTCCTGAAGATCGCGCAGGAGCCGATCTCGCTCGAGACGCCGATCGGCGAAGAGGAAGATTCGCATCTTGGAGATTTCATCGAAGACCGTCAGGTCGTATCGCCGGCCGAAGCCGTCATCAACCTGAATCTGAAGGAACAGACCGAGTCGGTGCTGAAGACGCTCACGCCGCGCGAGGAGAAGGTCATCAAGATGCGGTTCGGCGTCGGCGACGGCAGCGAGCACACGCTCGAAGAAGTCGGCCAGAGCTTCGCCGTCACGCGTGAACGGATCCGGCAGATAGAGGCAAAGGCTCTGCGCAAACTGCGGCACCCTTCGCGGAGCCGCAAGCTGCGCGCGTTTCTCGAGGGACGGACGTCGTAA
PROTEIN sequence
Length: 573
LSIEEKYDEVRQLINIGKEKGYLLYDEVNELLPSEITSSDELDDLFNTFGSAGIEVIDSDQKYLRDDVKPIDRTQEGAEELELDLTPGALDKTNDPVRMYLREMGTVPLLTREGEVEIARRIERGKLAVIKSISRTPLISKKVILLGDQLHTGERTIRELVIFNDEEITDERIVERSRQVQKQIDAVRKARAAYEKLEEKLAETPKGTTTRDKRKYRRCRWHAMRAQVELSQAIRRIEFTEAVKRRLIDEMKDAVESVRSVQREVEANERQLNPKNKKIKLKEEDKKNIQRQIKELRLKIKGITDVLEQSPDELKQTLDVILRGEYQAEQAKKELVEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRALVQELGREPTSEEIAKRMDIPVSKVRKVLKIAQEPISLETPIGEEEDSHLGDFIEDRQVVSPAEAVINLNLKEQTESVLKTLTPREEKVIKMRFGVGDGSEHTLEEVGQSFAVTRERIRQIEAKALRKLRHPSRSRKLRAFLEGRTS*