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13_1_40cm_4_scaffold_12504_11

Organism: 13_1_40CM_4_Deltaproteobacteria_68_19

partial RP 40 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 7 / 38
Location: comp(7582..9267)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZN4_SORCE similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 443.0
  • Bit_score: 346
  • Evalue 6.90e-92
Type IV fimbriae expression regulatory protein PilR {ECO:0000313|EMBL:EYF03411.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chon similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 418.0
  • Bit_score: 357
  • Evalue 4.20e-95
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 443.0
  • Bit_score: 346
  • Evalue 2.00e-92

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1686
GTGCCGCTCGCGTCGCAGACGATTTCGAAAGACTTCACGCCATCGGCGAACGGGGACGTCCCGCACCTGTTTCTCGCCCTGGTCTGCGACCGGCTGTCCGTTCCGTCGATCCGCATCTGCCTGCATGGCGTCGAGGAGCTCTCGATCGGGCGGGGCGATCTCGACCGCGGTGGCGAGCGGTCCGGGAGCGGAGCTCGTCTCGCACTGTGCGTTCCGGATGATCGGATGTCCGGAGATCACGCGACGTTCCGCCGCGTGATGGGTCGGTGGTTCGTCGAGGACACCCACTCGCGGAACGGGACGCTCCTCAATGGACGGCGCATCGATCGCAAGGTCCTCGAGGATGGCGACCTGCTCGAGCTCGGTCATTCGTTCTTCATCTTCCGTGGCGCGATCCCTCCTGCGCCAGCCGCGGGGCCCGTCGTCTATAGCGACGAGAGACGCCCGGCGGCGGAGGGGTTCGAGACGCTTCTGCCCTCGCTGGCACGGGAATTCGTGCGCGCAGAGACGATTGCCCGCACGTCCATCCCCGTGGTCCTGCGTGGAGCGACCGGGACCGGCAAGGAGGTGATCGCCTCCGCGATCCACGCGCTCTCGGGGCGGCATGGAGCTTTCGTCCCGGTGGACTGCGGAGCGCTCTCCCCTGCCCTCTTGCAGTCGGAGCTGCTCGGCCACTGCAAGGGAGCATTCAGCGGCGCCCGCGAGGACAGGGCCGGACTCGTCCGGAACGCGGACGGGGGCACGCTGTTCCTCGACGGCGTGGAAGAGCTGCCCGCTGCCGCGCAGCCCCTCCTGCTGCGCGTTCTCGAGCATGGAGAGGTCCTGCCCGTCGGGGCCAAAGCACCGATCAAGGTGGACGTCCGGGTGGTCGCGGCGAGCCAGCAGAATCTGGAGGCGCTCGCGGCAGAGCAGCGGTTCCGCAGCGATCTGCTCGCGCGGCTGTCCGGGCTCACCCTGGAGCTCCCTCCCGTACGCGAGCGCCGTGAGGACCTCGGGCTGCTCGTCCGCGCCCTCTTGCGCCGCAAGCTCGGGCAGTCCATGGACGAGGTCGGCTTCACCTGCGAGGCAGCCCGGGCGCTGTTCGTGCACGGTTGGCCGCGCAACCTGCGGGAGCTGGAAAAGGCCCTGGAGGCCGCGCTCGTGCTCGCCGGCCGCGAGCGCATCGGACTGCACCATCTCCCAGCCGCGGTGGTCAGGGAACCTCCACTCCCGGCGAATGCGGAGACGCCTCTCGCCGGGCCGCCCGCCGGCGCCACCGCGCCTGCCGCCAAGGTGCAGCACTTCATCGACGAGCTTTCGCGCCGGCACGTCGTGCGCGTGGTGGTCGCCTATGCGGTGGCCGTGTTCGGGGCGCTGCAGGGCGCGGACGTAATCGTGACGCGGCTCTCGCTACCGCCGCAGTGGATGACCTGGATTGTCGCCGCGTGCCTGGCGGGGCTGCCGGTGGCCGTCATCCTCGCCTGGATCTTCGACTGGACGCGCCAAGGCATCGTTCGCACGCCGCCCATCTCTGCCGATCAGCGGGCGCTGCTTGCGCGGGGACGCCGCCGCCGGAAGCGGACCCTCGTTCTGGCCGGGTGCATATTGGGAGTCATCGGCGCCGTCGGCGCGATGTGGTGGCGAAATCGCGCCAGGCCCTCCCCTTCGACGCGGCAGACGAACCGCGCCACGGAGCGGACACCGTAA
PROTEIN sequence
Length: 562
VPLASQTISKDFTPSANGDVPHLFLALVCDRLSVPSIRICLHGVEELSIGRGDLDRGGERSGSGARLALCVPDDRMSGDHATFRRVMGRWFVEDTHSRNGTLLNGRRIDRKVLEDGDLLELGHSFFIFRGAIPPAPAAGPVVYSDERRPAAEGFETLLPSLAREFVRAETIARTSIPVVLRGATGTGKEVIASAIHALSGRHGAFVPVDCGALSPALLQSELLGHCKGAFSGAREDRAGLVRNADGGTLFLDGVEELPAAAQPLLLRVLEHGEVLPVGAKAPIKVDVRVVAASQQNLEALAAEQRFRSDLLARLSGLTLELPPVRERREDLGLLVRALLRRKLGQSMDEVGFTCEAARALFVHGWPRNLRELEKALEAALVLAGRERIGLHHLPAAVVREPPLPANAETPLAGPPAGATAPAAKVQHFIDELSRRHVVRVVVAYAVAVFGALQGADVIVTRLSLPPQWMTWIVAACLAGLPVAVILAWIFDWTRQGIVRTPPISADQRALLARGRRRRKRTLVLAGCILGVIGAVGAMWWRNRARPSPSTRQTNRATERTP*