ggKbase home page

13_1_40cm_4_scaffold_153_21

Organism: 13_1_40CM_4_Deltaproteobacteria_68_19

partial RP 40 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 7 / 38
Location: 21304..22842

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase, SLT, LysM and LysM domain-containing; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 275.0
  • Bit_score: 157
  • Evalue 4.50e-35
Lytic transglycosylase catalytic n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD11_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 287.0
  • Bit_score: 139
  • Evalue 1.20e-29
Lytic transglycosylase catalytic similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 287.0
  • Bit_score: 139
  • Evalue 3.30e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyA12_full_Deltaproteobacteria_61_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGATCCGGATCATCCACCTCTCCGGGAGTCAGCAGGGAAAGACCGCGACGTCGGCGAAATCCACGGTGCGGGTGGGCCGCGCCGCCGACTGCGACGTCCGCTTCGACAAGGAGCGCGACCCGAAGGTTTCCAACCACCACGCCGAGTTCCTCTTCGAGGACGGGTGCTGGTTCGTCGTCGACACGGCGAGCACGAACGGGACGCTGATCGAGGGGCGGCGCGTCGCGAAGTGCCGGCTGCGCCAGGGTGAGCAGGTGCAGATCGGCGCGGGCGGTCCGCTGGTCCGCGTGGAATTCGACGCAAAGGACGGATCGGGCGGCGCGATGAAGACGGAGGCAGCGACCGTCACCGCCATCGAGCGCGCCGAGGCGGCGCGCCGGGGCACGCCGGCGCGAATCGACGCAACCTCCGAGATGAACAAGATCGCCACCGACCTGAAGGAGAACGCCGATACCACCACCGCGAAGCTCGCGGAGATCGCGGCGAAGAAAGTGGCGCAAGAGCGCGCGAAGGCCGGCGGCATGCCCTCCGGCAAGACGATGCTGATCATGGCCAGCACCATGAAGCAGGTGCAGCACTCCACCAAGGCGAAGACGGCGAAGCGTTGGGTGAAAGTGGTGGCCCTGGTGGCTGGCGTGGCGGCGGTGACCGTGGCGGTGATGGGCATCGTGATCGCGCAGCAGAAGCGGCAGATCGAACAACTGGTGAAGCAGAAGGAGCACCTCGACAAGGAGATCGAGGCCGTCGAGGCGCTGATGAACGAGGAATCCGACCCGGAGCGCCTCGCGTCGCTCGAGGAGAAGCTCAACACGCTCACCGGCAATGCGAAGAGCACGCTGGCGGCGCTCGACAAGTCGGACAAGAGGAAGGCAGCAGCGCTGGCGGAGTCCGGCGATGCGCTCGACCGGCAGATCCGGGAGATCCTCGCCAAGTTCGACGCCAGCACGTACGCGGTGCCGCTGATCTTCAAGGAGCGGCTGAAGTTCCACATCGACGCGCTGGTGAACGCGCCGAATCTGAAGTTCGTCTACCGACGCAAGCAGCGCTACTGGCCCATGATCACGCGCGAGTTCAGCGCGCTCGGCCTGCCCGAGGAGATGGCCTACGTCGCCTGGGCGGAAACGCAGTTCGACCCCAAGGCGAAGAGCCCGGTCGGAGCGGCGGGCATGTGGCAGATGACGACGACGACCGCGCAGAGCTACGGATTGCGCGTGGACGCCAACATGGACGAGCGCTACGACCCGGAGCGCGAGACGAAGGCGGCGGCGCGGCACCTGGCGAACCTCCTGGCCGAGTACGGCACCGACTCCTTCATGCTGGCGATGGCGTCGTACAACCGGGGCGAGGCGGGAGTGCGGCGCGTCCTGCACCAGATCGCGCGAGAACCCGGCGGCTTCCGCAAGGAGAAGCGCGACTTCTGGCACCTGTACCGGTTGAAGAAGCTGCCGGAGGAGACGCGCGAATACGTCCCGAAGGTGCTCGCAGCGGCGATCGTCAGCCGCGACGCAAAGAAGCTCGGCCTCGACGAACCGGATTGA
PROTEIN sequence
Length: 513
MIRIIHLSGSQQGKTATSAKSTVRVGRAADCDVRFDKERDPKVSNHHAEFLFEDGCWFVVDTASTNGTLIEGRRVAKCRLRQGEQVQIGAGGPLVRVEFDAKDGSGGAMKTEAATVTAIERAEAARRGTPARIDATSEMNKIATDLKENADTTTAKLAEIAAKKVAQERAKAGGMPSGKTMLIMASTMKQVQHSTKAKTAKRWVKVVALVAGVAAVTVAVMGIVIAQQKRQIEQLVKQKEHLDKEIEAVEALMNEESDPERLASLEEKLNTLTGNAKSTLAALDKSDKRKAAALAESGDALDRQIREILAKFDASTYAVPLIFKERLKFHIDALVNAPNLKFVYRRKQRYWPMITREFSALGLPEEMAYVAWAETQFDPKAKSPVGAAGMWQMTTTTAQSYGLRVDANMDERYDPERETKAAARHLANLLAEYGTDSFMLAMASYNRGEAGVRRVLHQIAREPGGFRKEKRDFWHLYRLKKLPEETREYVPKVLAAAIVSRDAKKLGLDEPD*