ggKbase home page

13_1_40cm_4_scaffold_18108_5

Organism: 13_1_40CM_4_Deltaproteobacteria_68_19

partial RP 40 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 7 / 38
Location: comp(2495..4063)

Top 3 Functional Annotations

Value Algorithm Source
two-component hybrid histidine kinase (EC:2.7.3.-) similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 302.0
  • Bit_score: 249
  • Evalue 2.30e-63
Sensor protein n=2 Tax=Sphingobacterium spiritivorum RepID=C5PU28_9SPHI id=72000 bin=ACD50 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 513.0
  • Bit_score: 352
  • Evalue 9.00e-94
serine phosphatase RsbU, regulator of sigma subunit Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 513.0
  • Bit_score: 352
  • Evalue 1.30e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OP11_Woesebacteria_38_26 → Woesebacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1569
ATGAAGCAGCTCAAGAGCCGAACGGAGGTGGCTTTCGGCTGTGCCGTCCTTTTCGCCGCGTACTTCGTCACCGCGCGGCTGGGGCTGCTCCTAGGCGCCGTGGCCGGCTTCGCCACGCTGGTCTGGCCACCGACGGGCATTGCGCTCGCCGCTCTGTGGCTCTTTGGCTCCCGCCTCTGGCCGGGCGTGTTCGCCGGGGCCCTTTGTGTCAACCTCGTCGTCGGCGCGCCGCTTCCGGCAGCACTCGGCATCGCTACAGGCAACACGCTGGAGGCGGTCGCCGGCGTGTGGGTGCTGTCCCGGGTCGGCTTCCAGACGCAGCTCGATCGCGTCGACGACGTCGTTGCGCTGATCATCGGGCCCGCGATCTGCAGCACCGCGCTGAGCGCATCGATCGGCGTGGCGAGCCTGCGCCTCGCTCGCATCGTCTCTTCCAGCGCAACCGTACCGGCGCTGCGAGCCTGGTGGATCGGCGACATGGTCGGCGACCTGGTGGTGGCGCCACTGCTCTTCGTCTTCCTCGGGCGGCAGCCGTTGCGAGGGCGCAGGTGGATTCGCGCCGAAGTGCTGCTTCTCGCCTGCGCACTCATCGCTCTCGGCTTGCTCGTCTTCGGAAACGCATTCGGAGGTTCCATCAGCCTGCGGCGGCACCCGTACATGCTTTTCCCACTGCTGGCGTGGGCGGCACTCCGGTTCGGGCAATACGGCGCGGTGAGTTCCGTGTTCCTCGTTTGCGGCATCGCCGTCACGGGCGCGGCCATGGGCTTCGGGCCGTTCGCGCGTCCGATCCTCGCCGAGTCGCTCCTCGACCTGCAGGCTTTCATGAGCGTGGTCGCGGGAACCACGCTGGTGCTCAGCGCAGCCATCGCCGAGCGAAACCGCGCCGTGGTGGCGCGCGACGAATTCCTCTCCATTGCCTCGCACGAGCTGCGGACGCCGTTCACTGCCCTGTCGCTTCAAGTCCAGGCCTTGATCCGCCGGCTGCGGCGCTCCGAAGGGATCCCGAGCCGCGACGAGTTGTTGGTGGATCTCGAGTCGGCGAATCGGCTGCTCGCGCGCGTGGCGAGGATGCTCGACGAGCTGCTGGAGGTCTCGCGGGTTGCGGCAGGCCGGTTCCAGCTGCAGCGCGAGGAGATGGACCTGGCGCAGTCGGTGCGGGAGAGCCTCGCCCGTTTCGAGAAACAACTCACGAGCGCGGGGTGCCCTGTGGAGCTGCGCCTCGAAGGGAAAGTCACCGGCCACTGGGATCCGGTCCGCCTCGATCAGGTCATCGACAACTTGATCAGCAACGCGGCCAAATACGGGGCCGGCAAGCCGGTCGAAGTCTGGCTGAACGACCGCGGTGAGCGCGTCGTGCTCGGGATTCGGGACTACGGCATCGGCATCGCTCCGGCGGACCAGTCGCGCGTGTTCGGGCAGTTCGAGCGCGCCGTTTCGCGCCGCCGATTCGGTGGCTTCGGCCTGGGACTCTGGATCACTCGCCGGGTCGTCGAAGCGCACGGGGGGACGATCAGCCTGACCAGCAAGCCAGGCCAGGGCTCGACCTTCACGGTCGAGCTGCCCCGTTAG
PROTEIN sequence
Length: 523
MKQLKSRTEVAFGCAVLFAAYFVTARLGLLLGAVAGFATLVWPPTGIALAALWLFGSRLWPGVFAGALCVNLVVGAPLPAALGIATGNTLEAVAGVWVLSRVGFQTQLDRVDDVVALIIGPAICSTALSASIGVASLRLARIVSSSATVPALRAWWIGDMVGDLVVAPLLFVFLGRQPLRGRRWIRAEVLLLACALIALGLLVFGNAFGGSISLRRHPYMLFPLLAWAALRFGQYGAVSSVFLVCGIAVTGAAMGFGPFARPILAESLLDLQAFMSVVAGTTLVLSAAIAERNRAVVARDEFLSIASHELRTPFTALSLQVQALIRRLRRSEGIPSRDELLVDLESANRLLARVARMLDELLEVSRVAAGRFQLQREEMDLAQSVRESLARFEKQLTSAGCPVELRLEGKVTGHWDPVRLDQVIDNLISNAAKYGAGKPVEVWLNDRGERVVLGIRDYGIGIAPADQSRVFGQFERAVSRRRFGGFGLGLWITRRVVEAHGGTISLTSKPGQGSTFTVELPR*