ggKbase home page

13_1_40cm_4_scaffold_24012_1

Organism: 13_1_40CM_4_Deltaproteobacteria_68_19

partial RP 40 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 7 / 38
Location: comp(2..1393)

Top 3 Functional Annotations

Value Algorithm Source
TonB family protein / TonB-dependent receptor n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SQQ7_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 477.0
  • Bit_score: 383
  • Evalue 2.50e-103
Ligand-gated channel protein {ECO:0000313|EMBL:AKF79596.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="M similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 474.0
  • Bit_score: 387
  • Evalue 3.10e-104
TonB family protein similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 470.0
  • Bit_score: 382
  • Evalue 2.00e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Myxococcus fulvus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGAAATGTGTTCTAAACGTGCGCGGCATGCGCTTCGCGCTCCTCCTCTGCCCGCTGTGCCTGGCCGGCGGTGCGCGCGGCCAACCCGTGCCGGATCCGCGGGGGGAACCTGTCCCCGAGGTCCTCACGCCGCCCAAGCTGATCGAGGAAGTGCCTCCGGAGTACCCGGCAGGGGCCAGCGGGAGCGCCCGCGTCGTTCTGCAGCTCGACGTCGACGAGCGAGGCGCCCCGGGCAATCTCCTGGTGCTCAGTGAGCCGCAGCCGGGGTTCGACGAATCGGCGCTCGCGGCCGCCCGGAAGCTCCGTTTCGATCCGGCCCGGCGCGGCGGTCAGCCGATCGCCGTCCGCATCCAGTACGCATTCAATTTCGCGCCTCCTGCCGCGGCGCAACCACCGCGCCCGGAAGAGCTGCCGGTGAACCTCGCCGGCCGCATCCGCGAGCGCGGCACGCGCCGCAAGCTGTCGGGCATCGAGATCTCCGCCGCAGGAAGGAGCGCTTCCACCGACCGGGAGGGCCGCTTCGAGCTTCGCGGCGTTCCCGAAGGCGAGCCGGTGGAGATCGTCGTCGCCGCGCCGGGGTACGAACGCTTCACCGCGCGCGAAACGATTCCCCCCGGGCAGAAGCTGGAGGTCGAGTACCGGCTGCAGGCGCTGTACTCGAGCCCGTTCGAGGCGACCATCGAGGGAGAACGGGAGCGCACCGAGATCTCCCGGACCACCGTGAGCAAGGAGGAGACCGAGCGGGTTCCGGGAGCGCAAGGAGACTCGCTGAAGGTCGTCGAGGATCTGCCGGGCGTCGCGCGCACGAGCCCCATCGGGGGCGGCGCGCTGGTGATCCGCGGCAGCAAGCCGGGCGATTCCGTCGTCTATCTCGACGGCGAGCCGATCCCGCTCCTCTACCACTTCGCCGCGCTCTCCAGCACGTTCAATCCGGACCTGCTCGAGGCGATCGACTTCGTCCCGGGGAACTTCAGCTCGCGCTACGGCGATCTGACGGGCGGGCTGGTCGAGGTGCGCACGCGCAAGCTCCGGGAGGAGCCGCACGGGTACGCCAACCTGAACCTGCTCGAGGCGAGCGCGCTCATCGAGGGCGCGATCCCTGAGGTGCCCGGGTTGAGCGTCGCTCTCGCCGGACGTCGCAGTTACATTGATTATATTCTGCGCGCGGCGCTTTCCGGCAACACCGATTTCTCGCTCACCGTCGCGCCGCGGTATTACGACGCGCAGCTCCGCGTCGACTGGCGCCCTCCGGACAACCCGCACAGTTTCTCTCTCCTCGCCCTGACCTCCGACGATGCGCTCGGGTTCGTGCTGAACCGGCCCACCGAGCAGGACCCGAATCTCTCCGGATCGATCGATGCGGAGACCGGCTTCCAGCAGATCCGGCTGAAA
PROTEIN sequence
Length: 464
MKCVLNVRGMRFALLLCPLCLAGGARGQPVPDPRGEPVPEVLTPPKLIEEVPPEYPAGASGSARVVLQLDVDERGAPGNLLVLSEPQPGFDESALAAARKLRFDPARRGGQPIAVRIQYAFNFAPPAAAQPPRPEELPVNLAGRIRERGTRRKLSGIEISAAGRSASTDREGRFELRGVPEGEPVEIVVAAPGYERFTARETIPPGQKLEVEYRLQALYSSPFEATIEGERERTEISRTTVSKEETERVPGAQGDSLKVVEDLPGVARTSPIGGGALVIRGSKPGDSVVYLDGEPIPLLYHFAALSSTFNPDLLEAIDFVPGNFSSRYGDLTGGLVEVRTRKLREEPHGYANLNLLEASALIEGAIPEVPGLSVALAGRRSYIDYILRAALSGNTDFSLTVAPRYYDAQLRVDWRPPDNPHSFSLLALTSDDALGFVLNRPTEQDPNLSGSIDAETGFQQIRLK