ggKbase home page

13_1_40cm_4_scaffold_3933_3

Organism: 13_1_40CM_4_Deltaproteobacteria_68_19

partial RP 40 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 7 / 38
Location: comp(1863..2300)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LLU2_THEM4 similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 141.0
  • Bit_score: 183
  • Evalue 2.00e-43
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 141.0
  • Bit_score: 183
  • Evalue 5.70e-44
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=391009 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Ther similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 141.0
  • Bit_score: 183
  • Evalue 2.80e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermosipho melanesiensis → Thermosipho → Thermotogales → Thermotogae → Thermotogae → Bacteria

Sequences

DNA sequence
Length: 438
ATGAAGACGGTGATGGGCAGCAAGAAGACCGTCCGGCGCGACTGGGTGGTCATCGACGTGAAGGACAAGGTGCTCGGCCGCGCGGCGACCACCATCGCCAGCGTGCTGCGCGGCAAGCACAAGCCCATGTTCACGCCCCACGCGGACTGCGGCGATTTCGTGGTGGTGATCAACGCGGACAAGGTGCGCCTCACGGGCAAGAAGTGGCACGACAAGAAGTACATCCACCACACCATGTACCCGGGCGGCCTCGTCGAGTTCTCCGCGGAGCAGGCCCTGCAGCGCGAGCCGACGCGCCTCGTCGAGGACGCCGTCCGCCGCATGCTGCCGCGCACCGCCCTCGGCCGCGCGCTGATGAAGAAGCTGAAGATCTACGCGGGCGACAAGCACCCCCACGCCGCCCAGAAGCCCGTCGCCATGGAAGCGGCGAACGCATGA
PROTEIN sequence
Length: 146
MKTVMGSKKTVRRDWVVIDVKDKVLGRAATTIASVLRGKHKPMFTPHADCGDFVVVINADKVRLTGKKWHDKKYIHHTMYPGGLVEFSAEQALQREPTRLVEDAVRRMLPRTALGRALMKKLKIYAGDKHPHAAQKPVAMEAANA*