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13_1_40cm_4_scaffold_4190_24

Organism: 13_1_40CM_4_Deltaproteobacteria_68_19

partial RP 40 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 7 / 38
Location: comp(21185..21568)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Vibrio harveyi RepID=UPI0003467FB9 similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 99.0
  • Bit_score: 89
  • Evalue 2.00e-15
Helix-turn-helix motif {ECO:0000313|EMBL:BAQ66929.1}; TaxID=1617448 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 101.0
  • Bit_score: 94
  • Evalue 1.50e-16
transcription regulator with HTH domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 105.0
  • Bit_score: 89
  • Evalue 5.70e-16

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Taxonomy

Geminocystis sp. NIES-3709 → Geminocystis → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGACGTCGAGCATCCTTCGGACGCCGAGCGTGACCGCTTGGAGGTGCTCACCATCCTGGTCGAGGCGTTCGAGGACAAGCACCACCCGATAGCACCTCCGAATGCCATCGAAGCCATTCGTTTTCGGCTGGACCAACTCGGTTTTCACACACCCGCTGCCCAGGCGAAGACGTTGGCCCGTCTCCTCGGCAGCCGCTCGCGCGCCTACGAGATCTTGCATGGGAAGCGCGGGCTGTCCGCACAGATGGTCACGAAGATCTGGCGCCGCTTGGATGTTCCGCTCGAATCGCTGGTCCGGGGTATGACCATGCGGAATCGATCGAGGGCTCGCGGACGCGCGAAGCGTTCCGATCACGTACCGAGGCGGACCGGCTCATCGTAG
PROTEIN sequence
Length: 128
MDVEHPSDAERDRLEVLTILVEAFEDKHHPIAPPNAIEAIRFRLDQLGFHTPAAQAKTLARLLGSRSRAYEILHGKRGLSAQMVTKIWRRLDVPLESLVRGMTMRNRSRARGRAKRSDHVPRRTGSS*