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13_1_40cm_4_scaffold_6442_14

Organism: 13_1_40CM_4_Deltaproteobacteria_68_19

partial RP 40 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 7 / 38
Location: comp(8667..10817)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QMZ3_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 741.0
  • Bit_score: 813
  • Evalue 2.00e-232
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cyst similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 741.0
  • Bit_score: 813
  • Evalue 2.70e-232
rpoD; RNA polymerase sigma factor rpod similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 732.0
  • Bit_score: 806
  • Evalue 5.20e-231

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Taxonomy

Cystobacter fuscus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2151
ATGGCCGACAAGAAGTCCGCAGCCGCCCGCAAGAAGAACGCCCACAAGGCCGAGGCCAGGAAGGGCAAGCGCGCGAGGAAGGCTGCGCCAGAGCCGAAAAGCCACGCGAGGCCTGCGGGCAATGCGGAGGCGCCGGCCGCGAAAGTAAAGCGGGGCGAGAAGCAGAACGCGCCGAAGCAGGCGAAGAAGGCGGTCAAGGCAGGCGAGGAAGAGGGGGAGGCGGACGAGCTCGGGGAAGGCGTCGAGCCCGAGGCGGACCTCGCGCTGCCCGACGTCGGCGACGACGAGGAGCTCGCGGCGGACGCGGAGATCGACGAGGACGGCGACGAGGATCTCGCTCCCCCGAAGAAGGGCAGCAAGGCCACGGAGCGCAAGGAGGTGAAGGACCTGCTTGCACTCGGCCGCGACAAGGGGTTCCTCACCTACGACGAAGTCAACGACGCGCTGCCCTCCGACATCGTCTCCTCCGACCAGATCGACGACGTGATGTCGATGTTCGGGGACAACGACATCGCCATCGTCGACGAGGCCAACAAGGTCAAGCTTCCAGAGACCAAGCCGCCGGAGCCCGAGCCGGTGGCGGCGAAGGAAGAGGACCAGGCGACCCCCCAGGAAAAAGCCGAGCAGGAGGAGGAGGACGCCTACTCCAAGTCCAACGATCCGGTGCGCATGTACCTGCGCAAGATGGGCTCGGTCTCGCTGCTCACCCGCGAGGGCGAGGTGGAGATCGCCAAGCGGATCGAGGACGGCGAGAAGGAAGTGCTCGACGCCGTGCTCCACTCCAGCATCGCCATCAAGGAGATCATCCAGATCGGCGAGCGGCTGCGGAAGGGCAAGATGCGCGTGCGCGAGGTCATCCGCGATGCGCCGGACGAGGACGACGAGACGTTCGACGAGCAGGGACGCACCGACCAGGTGGTGAAGCTGATCGACAAGATCCGCCGGCTCGACCGCGAGAACGAGCACTTCACCGAGCTGATGACCTCGAAGACGCACAAGATCTCCGAGGGCAAGCGAAAGGAATACCGCGACGCCATCGCCCGCAACGAGGCGGCCATGGCGGAGACGCTCTCCGAGGTGAAGCTCAACAAGCGCCAGATCGAGCGCATCATCGAGAACCTCAAGAAGCTGATCGAGCGCGTCGACCAGGTCGAGCGGGAGATGCGCCACATCGAGCAGCGCCTCGGGGTGGGGCTCAAGGACCTCAAAGCGCTGCTCCGCGATGCCGAGGACGAGGGAAAGACGGGTCTCGGGGCGCGCAAGAAGCTGAAGGTGCTGGGGCTGTCGGAAGAAGAGGTGGGCGAGGTTGCCCGCGCCATCGCCGCGGCGCCCCGGAAGGTCAAGCGCGTCGAGGAGGAGGCGCTGCTTCCGCTCGACGAGCTCAAGCGCAGCTACGCGGCGATCATCGCCGGAGAGCGCAAGGCGGAGAAGGCCAAGGCGGAGTTGGTCGAGGCGAACCTGCGCCTGGTGGTCTCGATCGCGAAGAAGTACACGAACCGCGGGCTTCAGTTCCTGGACCTGATCCAGGAGGGCAACATCGGCCTGATGAAGGCGGTCGACAAGTTCGAGTACAAGCGGGGATACAAGTTCTCCACCTACGCCACCTGGTGGATCCGGCAGGCCATCACCCGGGCCATCGCCGATCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGCTGATCCGCACCTCGCGCTACCTGGTGCAGGAGATCGGCCGCGAGCCCACTCCCGAGGAGATCGCGGAGAAGATGGAGCTGCCGCTCGACAAGGTGCGCAAGGTCCTCAAGATCGCGAAGGAGCCCATTTCGCTGGAGACCCCGATCGGCGAGGAAGAGGACAGCCACCTCGGCGACTTCATCGAGGACAAGGCGATCACCTCGCCCTCCGATGCCGTGATCAACATGAACCTGGCGGAGCAGACGCGCAAAGTGCTCGCCACGCTCACGCCGCGCGAGGAGAAGGTGCTGCGGATGCGGTTCGGCATCGGGGAGAAGTCGGACCACACGCTCGAGGAAGTGGGCCAGGACTTCGAGGTCACGCGCGAGCGCATCCGGCAGATCGAGGCCAAGGCGCTGCGCAAGCTGCGGCACCCGTCGCGGTCGAAGCGGCTGCGCAGCTTCGTGGAGAATTAG
PROTEIN sequence
Length: 717
MADKKSAAARKKNAHKAEARKGKRARKAAPEPKSHARPAGNAEAPAAKVKRGEKQNAPKQAKKAVKAGEEEGEADELGEGVEPEADLALPDVGDDEELAADAEIDEDGDEDLAPPKKGSKATERKEVKDLLALGRDKGFLTYDEVNDALPSDIVSSDQIDDVMSMFGDNDIAIVDEANKVKLPETKPPEPEPVAAKEEDQATPQEKAEQEEEDAYSKSNDPVRMYLRKMGSVSLLTREGEVEIAKRIEDGEKEVLDAVLHSSIAIKEIIQIGERLRKGKMRVREVIRDAPDEDDETFDEQGRTDQVVKLIDKIRRLDRENEHFTELMTSKTHKISEGKRKEYRDAIARNEAAMAETLSEVKLNKRQIERIIENLKKLIERVDQVEREMRHIEQRLGVGLKDLKALLRDAEDEGKTGLGARKKLKVLGLSEEEVGEVARAIAAAPRKVKRVEEEALLPLDELKRSYAAIIAGERKAEKAKAELVEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQEIGREPTPEEIAEKMELPLDKVRKVLKIAKEPISLETPIGEEEDSHLGDFIEDKAITSPSDAVINMNLAEQTRKVLATLTPREEKVLRMRFGIGEKSDHTLEEVGQDFEVTRERIRQIEAKALRKLRHPSRSKRLRSFVEN*