ggKbase home page

13_1_20cm_2_scaffold_4006_10

Organism: 3_1_20CM_2_Acidobacteria_59_7

partial RP 34 / 55 MC: 3 BSCG 31 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 8936..9523

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=204669 species="Ba UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 194.0
  • Bit_score: 165
  • Evalue 8.20e-38
2',5' RNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) IPR0_KORVE">RepID=Q1IPR0_KORVE similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 194.0
  • Bit_score: 165
  • Evalue 5.80e-38
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 194.0
  • Bit_score: 165
  • Evalue 1.60e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Koribacter versatilis → Candidatus Koribacter → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGCGAATTTTCGTTGCCCTCGACATCGATGATGCCGTCCGCGAGCGCATTCAACGCTTCCTGGAAGGCGTACGCGGCTTCGCGCCTGATGCCCGCTGGGTGCGTCCCGAGTCGCTGCACATCACGCTGAAATTTATCGGCGAGAAGCCGACGGAGGCCGTGGAAGAAATCAAACGCGTACTCTCTGCTATTGAGGCCAAGGCGGTGGAAATCACTTTTCGTGGCTACGGATTCTTTCCGACTCCCAAAGCTCCTCGCGTCTTCTGGGTTGGCATCGAGTCCGGCCCCCGAGTCGCCGCCCTGGCCGCCGCCGTGGATACGGCCACGGTGGCGCTCGGCCTTCCTAAAGAAGAACATGCTTTCAGCCCGCATCTCACGCTCGCCCGCGGCGGGGCAGGTTCCGGCGTGCCCCGCTGGCGCAAAGGGGACGGCCCGAATAAGAGCTTCCAGCGCCTGCAGGAGAAATTGGCCGCCATGCCTGCTCCCGAGTTTGGTACCATGACGGGCCGCGAGTTCTTTTTGTACGAGAGTCAGCTTTCGCGTGGTGGCTCGCGGTACACGAAAATCGCGCGCTTCGCGCTGCAATAG
PROTEIN sequence
Length: 196
MRIFVALDIDDAVRERIQRFLEGVRGFAPDARWVRPESLHITLKFIGEKPTEAVEEIKRVLSAIEAKAVEITFRGYGFFPTPKAPRVFWVGIESGPRVAALAAAVDTATVALGLPKEEHAFSPHLTLARGGAGSGVPRWRKGDGPNKSFQRLQEKLAAMPAPEFGTMTGREFFLYESQLSRGGSRYTKIARFALQ*