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13_1_20cm_2_scaffold_2711_2

Organism: 13_1_20CM_2_Rokubacteria_68_19

partial RP 22 / 55 MC: 1 BSCG 26 / 51 ASCG 11 / 38
Location: comp(578..1096)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDD3_PROFC similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 191.0
  • Bit_score: 138
  • Evalue 8.70e-30
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;" UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 169.0
  • Bit_score: 141
  • Evalue 1.10e-30
rpoE; RNA polymerase sigma-70 factor, sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 191.0
  • Bit_score: 138
  • Evalue 2.50e-30

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Taxonomy

Actinotalea ferrariae → Actinotalea → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGCGACGGAGCGAGCGGGCGACGTTCGGCAGGTCGGGCGCGAGGCGCTCGCCTACGCCGACACGCTCCACAATCTCGCCCACTATCTCGCCGGCAACGACCCGGACGCCCAGGACCTCGTGCAGGAGACGTACGCGCGGGCGCTACGGTCGCTCCACCAGTTCACGCCGGGGACGAACCTCAAGGCGTGGCTGTGCCGCATCCTGCGCAACACGTTCGTGAGCGAGTACCGCCGGCGGCGGGGCAGCCCGGTGGTGGGCGGCCTCGACACCGTCGATCCCGTCCACGACGTGGCGGATCACGAGATCGACGCGCTCAGGAAAGTCATGGCCGACGAGCTCCAGACCGCGCTGATGAGCCTGGGCGAGGATGCGCGGACGGTGATCCTGCTCGATCTGGAAGGCCTCACGGAGGTGGAGGTGGCCGAGGTGATGGGGTGTGCGGTCGGCACGGTGAAGTCGCGACTCTCACGGGCGCGGGCCTCGTTGCGCCGCCTCATCGGCGACGCGGCCCGCTAG
PROTEIN sequence
Length: 173
MATERAGDVRQVGREALAYADTLHNLAHYLAGNDPDAQDLVQETYARALRSLHQFTPGTNLKAWLCRILRNTFVSEYRRRRGSPVVGGLDTVDPVHDVADHEIDALRKVMADELQTALMSLGEDARTVILLDLEGLTEVEVAEVMGCAVGTVKSRLSRARASLRRLIGDAAR*