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13_1_20cm_2_scaffold_3455_10

Organism: 13_1_20CM_2_Rokubacteria_68_19

partial RP 22 / 55 MC: 1 BSCG 26 / 51 ASCG 11 / 38
Location: comp(10507..10845)

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 112.0
  • Bit_score: 196
  • Evalue 2.50e-47
RNP-1 like RNA-binding protein alias=gwe2_scaffold_403_14 id=2014223 tax=GWE2_OD1_ACD81_47_12 species=Polaromonas genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 115.0
  • Bit_score: 114
  • Evalue 6.70e-23
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 111.0
  • Bit_score: 110
  • Evalue 3.60e-22

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGCCCGCAAAGTTGTTCGTCGGTAATCTCTCATTCCAGGCCACGGAAGAAGATCTGCGCGAGTTGTTCGCTCAGGCCGGAAACGTGGAAACAGTGCGCATCATCACGGACCAGTTCACCGGTCGTCCGCGCGGCTTCGGCTTCGTGGAGATGGCGACCAAGGAAGAGGCATCAAAGGCTATCGAGGTACTCAATGGTCGGCTCTTCCGCGATCGGAACCTGGTCGTCGACGAGGCCCGTCCCCAGCCACAGCGCAGCCCCGGCGGCGGAGGGGGCGACCGTGGTGGACGCGGCCCGCGTCCGGGCGGGGGCTCTGGCGGCGGAAGCTGGCGGCGCTGA
PROTEIN sequence
Length: 113
MPAKLFVGNLSFQATEEDLRELFAQAGNVETVRIITDQFTGRPRGFGFVEMATKEEASKAIEVLNGRLFRDRNLVVDEARPQPQRSPGGGGGDRGGRGPRPGGGSGGGSWRR*