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13_1_20cm_full_scaffold_793_6

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: 8507..9109

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 188.0
  • Bit_score: 218
  • Evalue 5.90e-54
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 188.0
  • Bit_score: 218
  • Evalue 8.30e-54
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 195.0
  • Bit_score: 173
  • Evalue 6.20e-41

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 603
ATGGCTCGTAACGATCACGGAAATAAAGGGAGATCGGAAGAAGACGCCGACGACGTGCGCCTCATGCAGCTCATCGGTCGAGGCGACACCATTGCGCTCGAGCAGCTAATCGAGAAACACCAAGCTTTGGTCGCCGGCACCGTAGCACGCATGCTGGGCAGCAATTCCGACGTGGAAGACATCGCGCAGCAGGTATTCATTCGAGTGTGGAAAAGCGCGCGTCGCTATGTCCCGCAGGCAAAATTCACGACCTGGCTATTGAAAATTACGCGTAATCTCGTTTTCAACGAACTCCGCCGCGCCAAGCGTCACGCGCATGTTCCACTTCAGCCGGAAGCGGGCGCAGAAGATCCGCCTCTGAAAGATGAGGCGAACCTGGCTCCCGATGCTTCCTTGCTGGAAGGGGAACTTCAGCGAACGATCGAAGCAGCCATCCTCCAGCTTCCAGAGACGCAGCGAATGGCACTGGTCCTCCGGAGGTATGAGCAGCTTAGTTATGAGCAAATTGCCGAGGTTCTTGACCTCTCAGTTCCCGCTGTAAAAAGCGTTCTCTTTCGCGCGCGCACCGAACTGCGCTCGCGATTGAGCAAGTATCTTGGTTAG
PROTEIN sequence
Length: 201
MARNDHGNKGRSEEDADDVRLMQLIGRGDTIALEQLIEKHQALVAGTVARMLGSNSDVEDIAQQVFIRVWKSARRYVPQAKFTTWLLKITRNLVFNELRRAKRHAHVPLQPEAGAEDPPLKDEANLAPDASLLEGELQRTIEAAILQLPETQRMALVLRRYEQLSYEQIAEVLDLSVPAVKSVLFRARTELRSRLSKYLG*