ggKbase home page

13_1_20cm_full_scaffold_8_12

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: comp(7921..9090)

Top 3 Functional Annotations

Value Algorithm Source
SAM-dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 386.0
  • Bit_score: 477
  • Evalue 1.50e-131
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000376AA9C similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 390.0
  • Bit_score: 435
  • Evalue 4.50e-119
  • rbh
SAM-dependent methyltransferase similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 395.0
  • Bit_score: 412
  • Evalue 1.20e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1170
ATGGCCGGAATCGTTGTCAAACCGCGAGCGCGAATTCTGCACGGACACGATTGGGTATTTTCCAGCGAAGTGCTGAAGGTCTTTGGAAAACCGGCGGACGGCGATGTCATCTCCCTAAAGGACGGTAAGGATCGTCTGATCGGCAGCGCGATCTACAATTCCAAGTCACAAATCGTGGGGCGCCGCTTTTCGCGTCGAAAACAGGAACTGGATCTGGATTTCTTCAAACGACGCATCGCCCAAGCGACAGAATACCGGACACGACGGGGTGTCGATCCCAAACTCTGCCGTGTCGTTTGGAGCGAAAGCGACGGCTTGCCGGGGTTGATCATCGACAGATACGGCGATCATTTCGTGATGCAAACGCTGACTCTGGCGATGGACATGCGAAAAGATTTGATCGCCAATGCGGTCATCGATCTCTTTGGAAACGCCACGATCATCGAACGAAATGACGCGCCTGTCCGCAAGGCGGAAGGGATGGAATTACGCAGCGGCGTTTTGCGCGGAGACAGTCCATCGCAAATCGGGATCGAAATCGAAGGCGTAAAGTTCGAAATCGATCTTTTGCATGGACAAAAGACCGGTTTTTATCTTGATCAAAAACACAATTATTCGGTTGTTGCCGGATACGCGCACGGCCGGCGCGTTCTGGATTGTTTCACCAATCAGGGAGCATTTGCGCTGACCTGCGTCCGCGCGGGTGCGGCGGATGTGACCGGGGTTGAAGAAAGCTCCGAGAACATCGCAGGTGCGAAACGAAACGCGGTGCGCAATGATCTGGAAGTGCGATGGATCGAGCAGGATGTCTTTCAGTTCCTGCGCGCGGCCGAAAAAGCCGGGGTGCAGTATGATTTGATTGTTCTCGATCCGCCGTCGTTTACAAAAACCAGGAGCGGATTGCGCGACGCGTTGCGTGGCTACCGGGAATTGCACATGCGCGTGTTCAAGCTGTTGTCAAAGGATGGTCTGCTGGCGACCTTTTCATGTTCCCATCACGTGAGCGATACCGCATTTTCGCAGGCAATCGCCGATGCGCTTGTCGACGCCCGGCGGTCCGCCCGACGGTTACGCCGGTTCGAGCAAGCGCCCGATCATCCCGTGCTGCCGACAATTCCCGAAACGGAATATTTCAAAGGCTTCCTTCTGGAAATGATGCCGGGACGGTAG
PROTEIN sequence
Length: 390
MAGIVVKPRARILHGHDWVFSSEVLKVFGKPADGDVISLKDGKDRLIGSAIYNSKSQIVGRRFSRRKQELDLDFFKRRIAQATEYRTRRGVDPKLCRVVWSESDGLPGLIIDRYGDHFVMQTLTLAMDMRKDLIANAVIDLFGNATIIERNDAPVRKAEGMELRSGVLRGDSPSQIGIEIEGVKFEIDLLHGQKTGFYLDQKHNYSVVAGYAHGRRVLDCFTNQGAFALTCVRAGAADVTGVEESSENIAGAKRNAVRNDLEVRWIEQDVFQFLRAAEKAGVQYDLIVLDPPSFTKTRSGLRDALRGYRELHMRVFKLLSKDGLLATFSCSHHVSDTAFSQAIADALVDARRSARRLRRFEQAPDHPVLPTIPETEYFKGFLLEMMPGR*