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13_1_20cm_full_scaffold_820_4

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: comp(1480..1845)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YID3_HALP7 similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 114.0
  • Bit_score: 116
  • Evalue 1.50e-23
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 114.0
  • Bit_score: 116
  • Evalue 4.20e-24
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AFZ45868.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothe similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 114.0
  • Bit_score: 116
  • Evalue 2.10e-23

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Taxonomy

Halothece sp. PCC 7418 → Halothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGCAACTGCCTGTTAAGATCTCGTATCGGGGTCTGGAAAAGTCTGACCAGATCGACAATCTCGTTTTGGATTATGCAGCGCGACTCGAGAAATTTTGCGATCATATCAATCGCTGCGATGTGGCCATTGAACAAACCAATCACACACATCAAAAAGGAAATCCTTACCGATGCCGGATCGATGTGACCGTGTCGCGCGGCCACGAGCTGGTTGCTGACGAAAGACAGACGGACAATGGCTCGCACCAGCCGCTCAACAAGGTGATCCACGACGCGTTCAAAACGATGGAGCGCGAACTGCGCCGCGTTGTGGACAAGCAAAGACGCGACGTCAAAACGCACGCCGATTCACGTTCCCCGAAATAG
PROTEIN sequence
Length: 122
MQLPVKISYRGLEKSDQIDNLVLDYAARLEKFCDHINRCDVAIEQTNHTHQKGNPYRCRIDVTVSRGHELVADERQTDNGSHQPLNKVIHDAFKTMERELRRVVDKQRRDVKTHADSRSPK*