ggKbase home page

13_1_20cm_2_scaffold_4_19

Organism: 13_1_20CM_2_Crenarchaeota_53_14

partial RP 32 / 55 MC: 4 BSCG 12 / 51 ASCG 23 / 38 MC: 2
Location: 16045..16758

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECM8_PYRF1 similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 226.0
  • Bit_score: 206
  • Evalue 2.70e-50
KH domain containing protein; K03679 exosome complex component RRP4 Tax=RBG_16_Archaea_50_20_curated UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 234.0
  • Bit_score: 286
  • Evalue 3.90e-74
KH domain containing protein similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 226.0
  • Bit_score: 206
  • Evalue 7.80e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 714
ATGGTACTAGTCGCTGAACCGAAACAGGTAGTGGCTCCGGGCGAGGTTCTCGCTGAAGGCGACCACCTGCTCGGGGACAACGCGTACCGCATCGGGACAAAGATATTCTCTGCGTGCGTGGGTATTCTAGAGGTAGATGGGAACAGGGTCTTTGTTGTGCCTTTGAAGGGTGGATACTTCCCCAGAGTAGGCGATCTGGTTGCTGGGAGAATCGTTGATATTGGATTGTCTGGATGGTTGGTTGACATCCGAGCTCCATACGAGGCTATGCTGCCTGCCTCAGAGACGCCAGGCCCTAGAGGTCCAAGGAGACGAGACCTCTCCACGAGTTACGAGGTGGGAGACATGGTGTTAGCTGAGATACTGGCGTTCGATCGGACGAGGGACCCCTTGCTTACAGTAAAGGGCCCGGGACTCGGGAAGGTTGCTTCTGGAAGGGTTGTAGAGATAAGTGCCGCGAAGATTCCGCGTCTAATTGGGAGAAAAGGGTCAATGATCAGCATGCTGAAGAAGGAGACGGATTGCCAGATAACCGTGGGCCAGAATGGCGTCGTTATGGTCTGGGGCAAGTCTCCGGAGAGCGAGAGGGTCGCGGTAGAAGCCATATACATGGTCGAACGTGAAGCTCACACAAGAGGACTGACAGATCGTATCCGGGAAATGATATCAAGATCGAGAGTAGTTGAACAAGTTGCCGGAACCCAAACAGCCTGA
PROTEIN sequence
Length: 238
MVLVAEPKQVVAPGEVLAEGDHLLGDNAYRIGTKIFSACVGILEVDGNRVFVVPLKGGYFPRVGDLVAGRIVDIGLSGWLVDIRAPYEAMLPASETPGPRGPRRRDLSTSYEVGDMVLAEILAFDRTRDPLLTVKGPGLGKVASGRVVEISAAKIPRLIGRKGSMISMLKKETDCQITVGQNGVVMVWGKSPESERVAVEAIYMVEREAHTRGLTDRIREMISRSRVVEQVAGTQTA*