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13_1_20cm_4_scaffold_3429_12

Organism: 13_1_20CM_4_Alphaproteobacteria_65_11

partial RP 25 / 55 BSCG 26 / 51 ASCG 3 / 38
Location: comp(8532..9416)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITA4_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 288.0
  • Bit_score: 490
  • Evalue 1.20e-135
  • rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacter UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 288.0
  • Bit_score: 492
  • Evalue 4.40e-136
rpoH; RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 288.0
  • Bit_score: 490
  • Evalue 3.40e-136

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGCCAGTCTTTCGGTCCCGTCTCTTTCCGGCGAAGGAAACCTGTCGCGGTATCTCCAGGAGATCCGCAAGTTTCCGATGTTGGAGCCGGACGAGGAATACATGCTCGCCAAGCGCTGGAAAGAGCGCGAAGACTCCGATGCCGCGCATCGGCTGGTCACGAGCCATTTGCGCCTCGTCGCCAAGATCGCGATGGGCTATCGCGGCTACGGTCTGCCCCTCTCCGAGCTGATCTCGGAGGGCAATGTCGGCATGATGCAGGCGGTCAAGCGCTTCGACCCCGACCGCGGCTTCCGCCTCGCGACCTACGCGATGTGGTGGATCCGCGCCGCCATCCAGGAATACATCCTGCACTCCTGGTCGCTCGTCAAAATGGGCACGACGGCGGCACAGAAGAAGCTGTTCTTCAACCTGCGCAAGCTCAAGGGCCAGCTGCAGGCGATGGAGGAAGGCGATCTGTCGCCCGAAAACCTGAAAAAGATCGCGACCGAGCTCGACGTCCCGGAGGCCGATGTCGTCAGCATGAACCGGCGGCTCGCCAGCCCCGATCACTCGCTGAACGCGCCGCTGCGCAGCGACAGCGAGGGCGAGTGGCAGGATTGGCTGGTCGATGACAGCGAGAGCCAGGAAACAAAGCTCGGCGAACGGCAGGAGCTGGGCCTCCGGCGCGATCTCCTCGAAAAGGCGATGACGCATCTCAACGACCGCGAGCGCCACATCCTGACCGAGCGGCGATTGAAGGAAAACCCGACGACGCTCGAGGATCTGTCGCAGCAATACGGAATCTCGCGCGAGCGGGTGCGGCAGATCGAGGTGCGCGCCTTCGAGAAATTGCAGAAGGCGATGAAGGCGGCCGCCGTCGAGCGCCGCCTCGTCACGCACTAA
PROTEIN sequence
Length: 295
MASLSVPSLSGEGNLSRYLQEIRKFPMLEPDEEYMLAKRWKEREDSDAAHRLVTSHLRLVAKIAMGYRGYGLPLSELISEGNVGMMQAVKRFDPDRGFRLATYAMWWIRAAIQEYILHSWSLVKMGTTAAQKKLFFNLRKLKGQLQAMEEGDLSPENLKKIATELDVPEADVVSMNRRLASPDHSLNAPLRSDSEGEWQDWLVDDSESQETKLGERQELGLRRDLLEKAMTHLNDRERHILTERRLKENPTTLEDLSQQYGISRERVRQIEVRAFEKLQKAMKAAAVERRLVTH*