ggKbase home page

13_1_40cm_3_scaffold_1999_8

Organism: 13_1_40CM_3_Acidobacteria_55_6

partial RP 21 / 55 BSCG 21 / 51 ASCG 3 / 38
Location: comp(4742..5161)

Top 3 Functional Annotations

Value Algorithm Source
Two component response regulator protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FX64_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 127.0
  • Bit_score: 87
  • Evalue 1.40e-14
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:CDM64649.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 117.0
  • Bit_score: 129
  • Evalue 3.50e-27
PhoB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 119.0
  • Bit_score: 84
  • Evalue 2.00e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGGATAACGACCAAGCAAATCCAATCAACGCGGGGATCGTCAACGCTGCCCACCAACCGTGCGTGCTCCTGGTCGAAGACGATCGTTCTGCGCGACGCTTCCTGGAGGTCACACTGCAACGCTGGGGATACAAAGTTATCGCCGCCGCGGACGGTTTGGAAGCAATGAAGCTCGCTCTCGCTTCGCCGATTGATGCGGTGGTCACAGATGCCATCTTGCCGTATTTGAGTGGCCAGCAGCTAGCCCGTTTTCTACGCAATAATGAAAAGCTAAGTCGTGTTCCCATCGTCTTGTTGACTGGACAGGAAAATAGAGATGCCGCATCTGCACCTGACGATTCAATCGACGCGTTTCTTTATAAGCCGGTGAAAGCGGAAGAATTGAAGAGTTGTCTAGCCGGCCTGATGCGCAGGACTTAA
PROTEIN sequence
Length: 140
MDNDQANPINAGIVNAAHQPCVLLVEDDRSARRFLEVTLQRWGYKVIAAADGLEAMKLALASPIDAVVTDAILPYLSGQQLARFLRNNEKLSRVPIVLLTGQENRDAASAPDDSIDAFLYKPVKAEELKSCLAGLMRRT*