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13_1_40cm_3_scaffold_956_8

Organism: 13_1_40CM_3_Acidobacteria_55_6

partial RP 21 / 55 BSCG 21 / 51 ASCG 3 / 38
Location: comp(9053..9595)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIU5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 169.0
  • Bit_score: 134
  • Evalue 1.30e-28
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 171.0
  • Bit_score: 198
  • Evalue 8.00e-48
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 179.0
  • Bit_score: 129
  • Evalue 7.10e-28

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 543
TTGTGCTCGATATTGTTGAATGAAGTGAGTGGTGATCTCGTCGTCGTCGCGCGCGTGGCCAGGACTCGAGGACTACGCGGAGAAGTGATTGCGGATCTGCTGACCGATTTTCCCGAGCGGTTCGACGCTCTGGAAAATCTGATTGCGGTGGCGCCTGATGGCAGCCGGAGATCTTTGCAAATTGAAGAGCACTGGTTTCAGGGACGCAGAATCGTTTTCAAGTTCGCCGGCTACGATTCGATCGAGGCCGCAAAGCAATTCGCCGGACTCGAACTCGCAGTACCTGTGAGCGAGCGGGTTGAGTTAGCTGACGATCAATTCTACGAATGGGAGCTGAAAGGCTGCCGCGTCGAGTCGATTGAGGGAGAACTCGTAGGCTGCGTAAGCGAGGTAATGCGAACGGGCGGAGTCGAAATCCTGGTCGTCGAAGATACCTCGGGACGTGAGTTCCTGATTCCCATGGCGCAGGAGATCTGTCTCAAGATTGATTTAAACCAGAGATTGATTCGCATCGATCCACCGCCAGGACTGCTGGAGTTGTGA
PROTEIN sequence
Length: 181
LCSILLNEVSGDLVVVARVARTRGLRGEVIADLLTDFPERFDALENLIAVAPDGSRRSLQIEEHWFQGRRIVFKFAGYDSIEAAKQFAGLELAVPVSERVELADDQFYEWELKGCRVESIEGELVGCVSEVMRTGGVEILVVEDTSGREFLIPMAQEICLKIDLNQRLIRIDPPPGLLEL*