ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

13_1_40cm_4_scaffold_1195_7

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: 8420..10813

Top 3 Functional Annotations

Value Algorithm Source
xarB2; xylosidase/arabinosidase (EC:3.2.1.37); K05349 beta-glucosidase [EC:3.2.1.21] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 784.0
  • Bit_score: 1187
  • Evalue 0.0
xarB2; xylosidase/arabinosidase (EC:3.2.1.37) similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 780.0
  • Bit_score: 938
  • Evalue 1.30e-270
Xylosidase/arabinosidase, family GH3 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L989_ZOBGA similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 780.0
  • Bit_score: 938
  • Evalue 4.50e-270

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2394
TTGAAAATCCTGTCTTGTGCAACTTTCATCTTCTTGATGACTCTGTTGACGGTAGTGGGTCAGCAGAGTATTTATCGCGGCAATTGGATCGATCTGAACAAGAATGGCCAAGTCGATCCTTACGAAGATCCATCGGTACCTGTTGAACGCCGCATCGAAGACCTGCTCTCGCGAATGACGCTGGAAGAAAAGACGGCGCAAATGGCGACGCTGTATGGATACAGCCGGGTCCTGAAGGATGAACTGCCGACGCCGGAATGGAAACAGGCCATATGGAAAGATGGGATTGGAAACATTGACGAGCATCTCAATGGCGTCACGAGCAACGGATTTCCCAAAACGAAGCGCTCCTATCCTTTCGCGGCGCACGCCGAAGCGATCAACACAGTTCAGCGGTTTTTCATCGAACAAACCCGGCTGGGGATCCCCGTCGACTTTACCAACGAAGGCATCCGCGGACTCGCCCACACGCGCGCGACGAGTTTCCCGTCGCAGCTCGCGGTGGCCAGCGCATGGGATCGCTCGTTGGTGGATGAGATCGGGCGCATCACCGGCCGTGAGGCTCGCGCGCTCGGCTACACGAACGTGTACTCACCGATACTCGACCTGGCGCGCGATCCGCGATGGGGAAGGACAGAGGAAACCTACAGCGAAGATCCATATCTCACAAGCGAGCTCGGGAAACATATGGTTCGAGCCTTGCAGTCGCAGCGCGTCGTCTCCACGCCGAAGCATTTTGCGGTCTACAGCGTTCCGAAGGGCGGACGCGATGGCTCGTCACGAACCGACCCTGAGGTCACTCCCCGCGAACTGGAGATGATCTATCTTCAGCCCTTCAAAGCGGCGTTCCAGGATGCCGGCGCGCTTGGTGTGATGAGTTCTTATAACGACTATGACGGCATTCCCATCACGGGCAGCTCGTATTTCCTCACCGACATTCTGCGCGGACGCTGGGGTTTCAAAGGTTATGTCGTGTCGGACAGCTCAGCCGTGGAAAACCTCGAAACGAAGTATCACGTTGCCGCGGACTATACGGAAGCCGTTCGCCAGGCGGTCGAGGCGGGTTTGAATGTGCGCACCGGCTTCACGCTGCCTGACGTCTACATCAACCCCCTCCGGCAGCTCGTGCGTGCCGGCGAGCTTCCGATGCGAATCATTGACGACCGCGTGCGCGACATTCTTCGCGTGAAGTTCTGGATTGGGCTTTTCGATCAGCCCTACGTTCCGAATCCGAGCGAAGCGGATCGAATCGTTCGCGATCCTCAACATCTGGCAGCCGCGCGGCGGGCGGCCCATGAGGGAATCGTATTGCTGAAGAATCAAGGCAACGTGTTGCCGTTGCGCAAAGACATGCGATCCATTCTGGTGACAGGTCCGGGGGCAACGGAAGTGGAGAGTTTGAATAGCCGTTATGGTCCATCCGATCTCGACGTCGTTTCTATATTGGATGGAATCCGCCAGAAGCTCGGGCCTGGAGTTCAGGTGCAATACACAAAAGGCAGTGAATTCGTCGACGCCGGATTTCCGGAAAGTGAAATCCTGCCCGTATTGCCGAATAGCCAGGAGCAGGCCGAGATCGAGCGAGCGAAGAATCTCGCCCAACAGGCCGACGCTGTCATCGTCGTCCTTGGCGAGAACCGTGATCTGGTCGGAGAGAGCCGCTCGCGTACGAGCCTGGATTTGACGGGGTTCCAGCTGAAATTAGCCCAAGCTGTGCACGACGCAGGAAAGCCCATGGTCGTTGTTCTGATGAATGGACGCCCATTGACGATCAATTGGATCGACCGCTTCGTGCCGGCTATCGTCGAAACGTGGTGGGGAAATGAATTCTTCGGATCCGCGGTTGCCGACGTTCTGTTCGGGGATTACAATCCGTCCGGTAAGTTGACGATCACGTTCCCAAAAACCGTCGGCCAGATTCCCTATAATTTTCCATACAAGCGCGGCTCTCAGATCCGGACGGAGAATTTGAATGCTCAAGAAAAGAAAACGATGGTTAATGGACCGCTCTACCCGTTCGGCCATGGCTTGAGCTATACGATCTTCCGGTATTCCGATCTTTCAATCGCACCGGCCGTACAAAAACCCGACGGCACAATCCAGGTCTCTCTTGATGTTGAAAATACGGGTGCGCGCGCCGGGGATGAGATTGTCCAACTGTACATTTCGGATGAAGTAACCAGTGTCATCTATTATGAAAGCGTTCTGCGGGGATTCGAGCGGGTTTCTCTCATGCCGGGGGAAAAGACTCGAGTTCGGTTTACGCTCGGTCCGCAGGACCTCATGCTCCTGAACCGGAATATGCAATGGGTCGTCGAACCCGGGCGGTTCCAAGTCCTGGTCGGCGCGTCTTCCGAAGACATCCGCCTCCGCGGCGCTTTCGAGATTCGTTGA
PROTEIN sequence
Length: 798
LKILSCATFIFLMTLLTVVGQQSIYRGNWIDLNKNGQVDPYEDPSVPVERRIEDLLSRMTLEEKTAQMATLYGYSRVLKDELPTPEWKQAIWKDGIGNIDEHLNGVTSNGFPKTKRSYPFAAHAEAINTVQRFFIEQTRLGIPVDFTNEGIRGLAHTRATSFPSQLAVASAWDRSLVDEIGRITGREARALGYTNVYSPILDLARDPRWGRTEETYSEDPYLTSELGKHMVRALQSQRVVSTPKHFAVYSVPKGGRDGSSRTDPEVTPRELEMIYLQPFKAAFQDAGALGVMSSYNDYDGIPITGSSYFLTDILRGRWGFKGYVVSDSSAVENLETKYHVAADYTEAVRQAVEAGLNVRTGFTLPDVYINPLRQLVRAGELPMRIIDDRVRDILRVKFWIGLFDQPYVPNPSEADRIVRDPQHLAAARRAAHEGIVLLKNQGNVLPLRKDMRSILVTGPGATEVESLNSRYGPSDLDVVSILDGIRQKLGPGVQVQYTKGSEFVDAGFPESEILPVLPNSQEQAEIERAKNLAQQADAVIVVLGENRDLVGESRSRTSLDLTGFQLKLAQAVHDAGKPMVVVLMNGRPLTINWIDRFVPAIVETWWGNEFFGSAVADVLFGDYNPSGKLTITFPKTVGQIPYNFPYKRGSQIRTENLNAQEKKTMVNGPLYPFGHGLSYTIFRYSDLSIAPAVQKPDGTIQVSLDVENTGARAGDEIVQLYISDEVTSVIYYESVLRGFERVSLMPGEKTRVRFTLGPQDLMLLNRNMQWVVEPGRFQVLVGASSEDIRLRGAFEIR*