ggKbase home page

13_1_40cm_4_scaffold_1294_10

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: comp(6093..7319)

Top 3 Functional Annotations

Value Algorithm Source
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 394.0
  • Bit_score: 321
  • Evalue 1.70e-84
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 425.0
  • Bit_score: 270
  • Evalue 3.80e-69
pleD; pleD gene product similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 454.0
  • Bit_score: 197
  • Evalue 8.20e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
ATGCTCGGGCCGCGCTTTTGGCCCACGATTTTCCTCGGAGCATTCCTCGTCAACCTGACGACCGCCGGCACTGCGCTCACCTCATTGGGAATCGCCGTTGGGAACACTTCGGAGGCACTACTGGCCTCCTATCTAGTCACACATTTTGCCGGCGGCCGCCATGCTTTCGAGAAGACCTGGAACATTCTCCGATTCGCTGTTTATGCCGGAGTTTTAAGCACCTCGGTCGCAGCCACGCTTGGCGTGGCGAGCCTTGCGCTGGGGGGATTTGCTCCCTGGAGCCAATACGGACTCCTCTGGCGGACTTGGTGGCTCGGCGACGCTACAGGAGCTCTGGTCTTTGCTCCCTTCCTGCTTCTCTGGAGTGCGAACCCTCGCCTGAAATGGTCTGGATGGGAACTTCTGGAAGGCGTGGGCTTGTTTGGCTCGATGCTATTCACGATAAGCATTGTCTTCGGCCCGACTTTTCACTTGCAGATGAAGGGAGATCCGTGGACGTTTCTTTGCTTTCCATTTCTTGTTTGGGCCGCTCTCCGGTTTGGTCCGCGCGAAGCCTCTGCGGCCATCTGCCTTCTTTGTGTGGCGGAGGTCGTGGGTACTGTCCACGGTTACGGGCCTTTTGCGGGGGGATCGACCAACAAGTCTCTGCTGCTCTTGCAGACTTTTGTTGCCGTCGAAGCCATGATGATTCTCATCTTTGCGGTGGAAGTCTCTGAGCGCCGCCGACAAGAACGACATGCAAAACGCCTTGCCGTTACGGATTCGCTCACGGGCCTTGCGAATTACCGGCTGTTGCTGGAGCGCATCGATACGGAGATTAAGCGCTACGGCCGCAACGGTCAGCCCTTCTCGGTGCTCTTACTCGATATGGACGGATTAAAAAAGATCAACGACACGTACGGCCACCTAGCGGGCAGCCTTGCGCTCTGCCGCATGGCAGAGGTTCTGCACTTGAGTTGCCGGGAGGTCGATACCGCCGCTCGCTACGGCGGCGACGAATTCGCCCTGGTTCTGCCGGAGACATCCTCGGAATATGCCGGCCTTGTCGCGGAGCGCATATCGAAGCGTCTTGCCGAGGACACCGAAATTCCGCGCCTTGCCGTCAGCATTGGCATCGCTGAGTATCCTGGTGATGGTCTCACCATAGAGTACATCCTCAGTGCGGCGGACCACGCCCTTTACGAGGCCAAACGCCAGGCCCGTTCTGTCACTGTGCCATCCTCTTAG
PROTEIN sequence
Length: 409
MLGPRFWPTIFLGAFLVNLTTAGTALTSLGIAVGNTSEALLASYLVTHFAGGRHAFEKTWNILRFAVYAGVLSTSVAATLGVASLALGGFAPWSQYGLLWRTWWLGDATGALVFAPFLLLWSANPRLKWSGWELLEGVGLFGSMLFTISIVFGPTFHLQMKGDPWTFLCFPFLVWAALRFGPREASAAICLLCVAEVVGTVHGYGPFAGGSTNKSLLLLQTFVAVEAMMILIFAVEVSERRRQERHAKRLAVTDSLTGLANYRLLLERIDTEIKRYGRNGQPFSVLLLDMDGLKKINDTYGHLAGSLALCRMAEVLHLSCREVDTAARYGGDEFALVLPETSSEYAGLVAERISKRLAEDTEIPRLAVSIGIAEYPGDGLTIEYILSAADHALYEAKRQARSVTVPSS*