ggKbase home page

13_1_40cm_4_scaffold_2352_20

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: 22481..22918

Top 3 Functional Annotations

Value Algorithm Source
Fe-S-cluster-containing hydrogenase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F11751 similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 144.0
  • Bit_score: 182
  • Evalue 3.40e-43
Hydrogenase {ECO:0000313|EMBL:KIF79934.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 143.0
  • Bit_score: 181
  • Evalue 6.30e-43
polysulfide reductase NrfD similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 143.0
  • Bit_score: 175
  • Evalue 9.00e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
GTGGCCTACGGCTACTTCTTCGAGTTTTTCCTTTCCATCTATAGCGGAAACAAATTCGACGTCTTCCTTGTCCAACAGCGGCTGCACGGTCCTTATGCTCCGTTCTACTACTCGCTGATTATTTGCAACATCCTGACGCCGCAACTGCTGTGGTCTTACAAGATGCGCCACAACGTCGTGGTCCTCTTCATCATGTCTATCATCGTGAACACTGGTATGTGGCTCGAGCGTTTTGTCATCGTGGTCATCAGCTTGACCCGCGACTTCGACCCGTCCGCATGGGGCCGCTACCAGCCCACCTTCTGGGATTGGGCCACCTTCATTGGTACCATCGGCATGTTTGTCATGCTGATCTTTTTGTTCGTCCGGGTTCTCCCCGCGATTTCCATTGCAGAAATGCGCGAGCTTGTAGCGGAAACGTCCGAGGAAAAAGAATGA
PROTEIN sequence
Length: 146
VAYGYFFEFFLSIYSGNKFDVFLVQQRLHGPYAPFYYSLIICNILTPQLLWSYKMRHNVVVLFIMSIIVNTGMWLERFVIVVISLTRDFDPSAWGRYQPTFWDWATFIGTIGMFVMLIFLFVRVLPAISIAEMRELVAETSEEKE*