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13_1_40cm_4_scaffold_5313_7

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: 8253..9227

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 292.0
  • Bit_score: 208
  • Evalue 1.10e-50
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12554557 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 306.0
  • Bit_score: 190
  • Evalue 2.80e-45

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGGCAGACGAGACTCCAAAACGCATTGGCAACCCTCCACTTACGGGTCTCTCCCGCCTTCTCGACGGTCGTGCCTCCCTCGTCGAGCAACTTTACGCCCAGTCGCAAGCGGCCCGCTGGGGGCTCTCCTTGGAAAAATTTTCCCTCTCTCTCGAACGCAGCGCCAGGAAGAGCTTTGCCACAGAGGAGACCGCTCGGCAAAAACTCGAGGATTATCTCGCCGCACTTCATCTGGGAGATCTGGCCCTGGCTGCCGCTTGCGCTGCGGGATGCGAGTCCGCCTGGGAACATTTCTTCGCTAGCTATCGCCCCTACTTGCGCGCGGCCGCCGCAGCAATCCTCCGCTGCTCTGCCGCTTCTGCGGAAGCCTGTGAGCTCGGCGATTCTCTGTTCACTGATTTGTACGGATTGGCGGACGGCAAAGGCTCCGACCGCTCGCTCTTCCGCTACTTCCACGGTCGCAGGTCGTTTAAGACCCAGCGCCATATTGATTCCATTCGTGCGAGCCGCCGCTTCGAAGAACTTGCCGAAGACGAGGCTGCCGAGGCAGAGCGAAAACCCTCGTTTGGCCAGCAAGTCCAGCCCGCTGACCCCCATCGTGAGCTCTATGCGTCCTTATTCGTCCGCGCCTTGCAGGCTGCGCTCGACCGCCTGCAGCCTCTCGAAAAAGACCGGCTGCGCCTCTACTACGCCGAAGAAAAAACGCTTGCGGAAATCGGCCGCCTCCTCGGCGAGCACGAATCCAGCGTGTCACGCCATCTCGATCGCGTGCGCCGCGATTTGCGGCAGTCGGTCGAGGAAATCCTTCGCTGCGGCTTTGTGGCCGCCAACGGCTCCCCGGCGCAACCCGGATTGAGTGATGCGGAAATCGCTCTCTGTTTCGAATACAGTGCCGAAAACACCCCCATCGATTTGGAAAAACTTCTGCCGCAGCCCCCCTCGCAGGGCCCGGTGGCCAGGAAGAGGCTGCGATGA
PROTEIN sequence
Length: 325
MADETPKRIGNPPLTGLSRLLDGRASLVEQLYAQSQAARWGLSLEKFSLSLERSARKSFATEETARQKLEDYLAALHLGDLALAAACAAGCESAWEHFFASYRPYLRAAAAAILRCSAASAEACELGDSLFTDLYGLADGKGSDRSLFRYFHGRRSFKTQRHIDSIRASRRFEELAEDEAAEAERKPSFGQQVQPADPHRELYASLFVRALQAALDRLQPLEKDRLRLYYAEEKTLAEIGRLLGEHESSVSRHLDRVRRDLRQSVEEILRCGFVAANGSPAQPGLSDAEIALCFEYSAENTPIDLEKLLPQPPSQGPVARKRLR*