ggKbase home page

13_1_40cm_4_scaffold_1619_9

Organism: 13_1_40CM_4_Chloroflexi_52_4

partial RP 20 / 55 MC: 1 BSCG 23 / 51 MC: 1 ASCG 3 / 38 MC: 1
Location: comp(8381..8998)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFJ4_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 203.0
  • Bit_score: 254
  • Evalue 1.00e-64
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH88674.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 203.0
  • Bit_score: 254
  • Evalue 1.40e-64
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 195.0
  • Bit_score: 128
  • Evalue 2.30e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 618
ATGCAGATACAAACAACATCAAACATACACACGATAGATATTACTGATGGCGATTTGGCACAACAAACACTGGCTGGCAACCCATACGCCTTTGAGGATCTTGTAAAGCGCTACAGTACACCGCTGTTTAACTTCATCTATCGCTTCCTGGGCGACTATGACCAGGCCTGCGATATCTTACAACACGTATTTATTCAGTTATATGGCTCCTTGAGCAGCCTGCGTACAGACAAGCCGTTAAAAGCATGGCTTTTCCAGGTCGCGCGTAATCGCTGCCTTGATGAACTGCGCCGCCAGCGAGTCATTCATTTCTCGGAATTAGAGTCGGTGAACGATGACGAAGAACTCTCGCCTCTAGCAACCATTCCCGCTAACGGTCCGCTCCCTGAAGAATTAGCAGAGCAAAGCGACCTGCAGCAGCGCCTGCAAGAAGCTATCCAGACCTTACCCATCAAGTTCCGCTCAGTGGTGCTGTTGCGCTATGCTGGTCAACTCAGTTTTTCTGAGATTGGCCAGACACTCAATATGCCCGAAGCAACGGCCAAGACCTACTACCAACGCGCCAAACCGCTCCTTCGCGCGGCTTTGATGAACCAGGTTGAGTACACCGCTCACTAA
PROTEIN sequence
Length: 206
MQIQTTSNIHTIDITDGDLAQQTLAGNPYAFEDLVKRYSTPLFNFIYRFLGDYDQACDILQHVFIQLYGSLSSLRTDKPLKAWLFQVARNRCLDELRRQRVIHFSELESVNDDEELSPLATIPANGPLPEELAEQSDLQQRLQEAIQTLPIKFRSVVLLRYAGQLSFSEIGQTLNMPEATAKTYYQRAKPLLRAALMNQVEYTAH*