ggKbase home page

13_1_40cm_4_scaffold_3014_2

Organism: 13_1_40CM_4_Chloroflexi_52_4

partial RP 20 / 55 MC: 1 BSCG 23 / 51 MC: 1 ASCG 3 / 38 MC: 1
Location: comp(1578..2381)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002F628E4 similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 238.0
  • Bit_score: 138
  • Evalue 8.00e-30
LuxR family two component transcriptional regulator {ECO:0000313|EMBL:ETT38675.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibac similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 238.0
  • Bit_score: 134
  • Evalue 1.60e-28
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 237.0
  • Bit_score: 128
  • Evalue 4.00e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paenibacillus sp. FSL R5-192 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 804
ATGGTAGAGAAGAAGGATGCAATGGTATCGCGTTCTAGTAAGTCTACGAAATTGCAAGCAGTTGATTTACTGAATATCTTGATTGTTGACGATCATGAAGTTTTTCGCTGTGGATTACGCGATCTGCTCAACAATATTGACGGTTTCCAGGTCGTTGCCGAAGCGAGTACTTGTCAAGAAGCCCTGGCACAATTAGAAGCGGTGCCCGTTGAATTAGTACTGTTAGACCTCTATTTGTCGGACGTCAAAGGTATTGATACAGTACATCAAGTACGAAAGGTATTTCCTCAACCTCGCGTCATTATCCTATCGGCAACATTGGATGATGACCTACTCCTGGAATCGGTATTGGCGGGGATATCCGGTTATCTCACAAAAGACACCCCTGCCGCTGATATCGTCAAGGCCCTAAAAGGGTTTCTACAGGGCCAATTGGCGATGATACCTCCTGTATTAACACGGCTCGTGGAACTGTTGGTCCAAAAGTATTATGCATTTGAAACAGCATTAACCATATATCAGCAAAATGAGACAAAAGCGTTTGATAGAGCTACATCCGAGATACCGACTCCTAACATAATCCCCCCAACACATTCGCCGCACATATCCCTGCCAAATCTAACCCCGCAAGAAGAAAAAGTCTACCAGTTAATGCGTCGAGGATATAGTAATAAACAAATAGCTTCTCAGCTCTTTATTTCACGGTTTACAGTAGGGAAGCATGTACAGAATATTCTACACAAACTTGGTGCGACCAACCGTACCCAGGCAGTATCATATAACTCATTTGAGGGGGTTGAATAA
PROTEIN sequence
Length: 268
MVEKKDAMVSRSSKSTKLQAVDLLNILIVDDHEVFRCGLRDLLNNIDGFQVVAEASTCQEALAQLEAVPVELVLLDLYLSDVKGIDTVHQVRKVFPQPRVIILSATLDDDLLLESVLAGISGYLTKDTPAADIVKALKGFLQGQLAMIPPVLTRLVELLVQKYYAFETALTIYQQNETKAFDRATSEIPTPNIIPPTHSPHISLPNLTPQEEKVYQLMRRGYSNKQIASQLFISRFTVGKHVQNILHKLGATNRTQAVSYNSFEGVE*