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13_1_40cm_4_scaffold_3454_6

Organism: 13_1_40CM_4_Verrucomicrobia_54_4

partial RP 20 / 55 BSCG 18 / 51 ASCG 6 / 38
Location: comp(5155..6024)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 286.0
  • Bit_score: 494
  • Evalue 6.20e-137
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 289.0
  • Bit_score: 557
  • Evalue 1.40e-155
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 272.0
  • Bit_score: 369
  • Evalue 6.50e-100

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 870
ATGAAAAAGAGTTATATGGCTGCCGAAGATAGCGATACCGGAATTAAGATTTACCTGCGCGAGATCGGGCAAATCCCGCTTTTGACTCCGGAACAGGAGATCGAGCTGGCCGCGAAGATAAAGAAGGGCGATCGCGAAGCGCGGGCGTTGATGATTCGGTCCAATCTGCGTCTGGTCGTCAAGATCGCGCACGATTACGCAAATCTCGGGCTGCCGCTTCTCGACCTGATCTCAGAGGGAAACATCGGGCTGATGAAGGCGGTCGAACGCTTTGATCCAGCGAAAGGCGGAAAGCTCAGCACGTACGCCGCGTGGTGGATTAAGCAGTCCATTAAGCGAGCACTGGCGAATCAGAGCAAGACGATTCGTCTGCCTGTGCATCTGGTGGACAAAATTTCCAAGATGCGCCGGGTTTCCTTGCAGATGAGCGAGGAACTTGGTCGTGAGCCGACAGACGAGGAACTTGGCGATGAGATCGGGATCGCGAGTGGAAAAGTTTCCCAGCTCAAAACCGTGTCGATTCGTCCGGCTTCGCTAGATGCGCCGATCAGCGACGATGATTCCACGGAGTTTGGCGAAATCGTGGGGGACGAGGAAGCTCAGACGCCCTTCGAACTGTTGCGCGACAAAAATCTCCGCAATGAAGTCGGTGGGTTGCTTGATGTTCTGGACGACCGCGAGAAGAAAATCATTTTCCAGCGCTTCGGCTTGGACGGCGGCAAGCCAAAGACGCTCGAGGAAGTTGGCAAGAAATTCGGCGTTACGCGGGAGCGCATCCGACAGTTACAGAACATTGCGCTTTCGAAACTCCGCCGTGCTCTAAGCAAGAAGGAACGCCCGGTCGACGTGGAGTTGCCAGTGGAAGCGTAA
PROTEIN sequence
Length: 290
MKKSYMAAEDSDTGIKIYLREIGQIPLLTPEQEIELAAKIKKGDREARALMIRSNLRLVVKIAHDYANLGLPLLDLISEGNIGLMKAVERFDPAKGGKLSTYAAWWIKQSIKRALANQSKTIRLPVHLVDKISKMRRVSLQMSEELGREPTDEELGDEIGIASGKVSQLKTVSIRPASLDAPISDDDSTEFGEIVGDEEAQTPFELLRDKNLRNEVGGLLDVLDDREKKIIFQRFGLDGGKPKTLEEVGKKFGVTRERIRQLQNIALSKLRRALSKKERPVDVELPVEA*