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13_1_40cm_4_scaffold_3702_1

Organism: 13_1_40CM_4_Verrucomicrobia_54_4

partial RP 20 / 55 BSCG 18 / 51 ASCG 6 / 38
Location: comp(1..978)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZA96_SHEVD similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 312.0
  • Bit_score: 161
  • Evalue 1.80e-36
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 312.0
  • Bit_score: 161
  • Evalue 5.20e-37
TonB-dependent receptor {ECO:0000313|EMBL:BAJ02941.1}; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella violacea ( similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 312.0
  • Bit_score: 161
  • Evalue 2.60e-36

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Taxonomy

Shewanella violacea → Shewanella → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGATAAAAAATGTGCTAAATAAGTTCGGATTCGTTCGCATCGCTTTTGCAGCGAGCGTCGGATTTCCTTTAATCTTCGCCGCAAACACATTTGCTCAACTACCGGCGCCACCGCCGCCTGCCCCGGCTCCGGCTGGGGGCCAGGCGGAAGTCGAGCGAGTGATTGTGACCGGTTCAAACATTCCGACTGCGGAAGAAACCGGGCCAAATCCGGTGGATACCTACCGTCCGCAAGACATCGAGAAGCTGGGTATCCGCAACGCAACGGACCTGCAAGAATTCATTCCGCAGGAGGCGGGTGGCACCGTCAACATGAACATCGGCAATGGTGGTGACGGTTCTGTCCAATTCAACCTGCGCGGGTTGTTGCCGAAGGAAACCCTGGTGCTGCTAGACGGAAAACGTGTCGCCTTTGGTTCGTTGGGCGGTGCCGGGACCAACGCCGGTGTCGACGTTAACCTCATTCCCTTCGTGATGGTTGATCACATCGACATCCTCAAAGATGGCGCCGCACCTATTTATGGCACGGACGCGATCGCCGGCGTGGTCAACTTCTTCTTGGTGCACAAGTTCCGTGGGCTGGAGATTGGGGGGAGTTACGGGAACACAGACCTGGGCGCCTCCAACGACATGGGTGAATGGGAGGCATGGATAAAAGCTGGCACGGGAGACGACAAGACCGACATTGTGGTGATTGCCGATTTCTGGGAGCGTACCGGCGGCCTCTTCAGCGGCGACCGGGACCTCTCCAGTAACGGCTTTCAAATACCCTTTGGGGGGTTCGATAATCGCAGCGGGAATTTCCCCGGCCGCGTTACAAGCCGCCGCTTACTCCCGAGCATCTTTTTCGCCGCGACCCCTCCTGGCGCAGGCAGTCTGCCGCAGTTCGGCGTCAACACCCCGTTGCCGCATTCAGCTCCGAACGGGGCAACTTCACCATTTTATAAGAACCCCTATGTAATTGCTCCCAATGCATAT
PROTEIN sequence
Length: 326
MIKNVLNKFGFVRIAFAASVGFPLIFAANTFAQLPAPPPPAPAPAGGQAEVERVIVTGSNIPTAEETGPNPVDTYRPQDIEKLGIRNATDLQEFIPQEAGGTVNMNIGNGGDGSVQFNLRGLLPKETLVLLDGKRVAFGSLGGAGTNAGVDVNLIPFVMVDHIDILKDGAAPIYGTDAIAGVVNFFLVHKFRGLEIGGSYGNTDLGASNDMGEWEAWIKAGTGDDKTDIVVIADFWERTGGLFSGDRDLSSNGFQIPFGGFDNRSGNFPGRVTSRRLLPSIFFAATPPGAGSLPQFGVNTPLPHSAPNGATSPFYKNPYVIAPNAY