ggKbase home page

13_1_40cm_4_scaffold_3767_3

Organism: 13_1_40CM_4_Verrucomicrobia_54_4

partial RP 20 / 55 BSCG 18 / 51 ASCG 6 / 38
Location: comp(550..3468)

Top 3 Functional Annotations

Value Algorithm Source
Type I site-specific deoxyribonuclease, HsdR family id=4960348 bin=GWC2_Syntrophobacterales_56_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 972.0
  • Bit_score: 1272
  • Evalue 0.0
type I site-specific deoxyribonuclease, HsdR family Tax=CG_Desulfob_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 971.0
  • Bit_score: 1270
  • Evalue 0.0
type I site-specific deoxyribonuclease, HsdR family similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 971.0
  • Bit_score: 1163
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Desulfob_01 → Desulfobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2919
ATGCCAGCCAGCCTCGCCACCGAATCCGCGACTGTTCAGGACCCGCTTGTCCGTTACGCGGGTGAGATCGGATGGGAAATCGTGCCGCAGTCTGAGGCTGTTAGTCTGCGCAAGGGCGAAGGCGGGATGTTTTTTTACAATCTGCTGGAGGAAACGCTTCTCAGATTAAATCCGGGCGTGATTACACCGGAGAATGTCGATGATGTCATTCGCCGATTGGAAGGCGTGCGGAACTCCATCGAGGGGAACGCGGAGATTCTGGCGTGGTTGCGCGGTGAGCGGTCGGTGCATGTGGCGGCGGAGAAACGGCAGCGGCAAGTGCGGTTGGTCGATTACGAGAATGTCGGTCAAAACATCTTTCAAGTGTCGCCGGAATGGGAATACACAAGCGGTTTAAGCAAACCGAATCGGGCGGATGTGATGTTTCTAATCAATGGCGTTCCCGTTGCGCTGGTGGAGACAAAGGGCGCGAAGAAAGGATTGGAGGAAGCCCTCGTGCAAATTCGCCGGTATCACCGCGAGACGCCAGAGATGCTGACCACTCCGCAGGTGTTCGATATCACGCATTTGCTCGAGTTCTACTACGGCGCGACCTGGAGCCTCGATCGCAAAAATCTCTTCAACTGGCGGGGGGAAGCGTCAGGAAATTTCGAGGCGAAGGTCAAAGGATTCTTCGAGCGCGAGCGTTTCCTGAAGATGCTAAAGGAATGGATTCTTTTTTATGTAAAGGACGACGAGTTGCGAAAAACTGTTCTACGGCAGCACCAAACGCGCGCGGTCGAGAAAGTCGTCCAACGCTGCGCAGATTCGAAGAAACGAACAGGGTTGGTCTGGCATACGCAGGGATCGGGCAAGACGTTTACCATGATCACGGCAGCACGGCTGATTCTGGAACTGAAAGATTTCTTCAAAACACCGACCGTTTTGCTGGTGGTGGATCGCAACGAGTTGGAAGGGCAACTCACAGGATGGGTCGAGCGGTTGTTAGGCGAACTGAGCAGCAGAGACATCAAAATCGAGTACGCCTGGCGCAAAGAGAGGCTGCGCGAACTCCTGGGATCGGATTTTCGCGGCCTGATTGTCTCGATGATTCACAAGTTCGATGGCATCCCGAAGAACATTAATACACGCGACAATTTCTATGTGCTGATTGACGAGGCCCATCGTTCGACCGGCGGTGATTTGGGAAATTATCTTATGGCGGCGCTGCCGAACGCGACATTGATCGGATTTACGGGCACGCCGATCGACAAAACAGCCTACGGCAAAGGGACATTCAAGGTGTTCGGCAAGGACGATGAAGAAGGTTATCTCGATAAGTATTCCATTGCCGAGTCCATCAGCGACGGCACCACGCTGAAGCTGAAATATGCGCTGGCGCCTAACGAGATTCGGTTGCCTGAGGAAATTCTGGAAAAAGAATTTCTCGATCTGGCAGAAGCCGAGGGCATCAGCGATGTGGACGATCTGAACCGCATTTTAGACAAGGCGGTAAAGTTGAAGGCGTTTCTCAAATCCGATGAACGCGTCAAAGCCGTCGCCAAATTTGTTGCCAAAGATTTCAAAGAGAAAGTGCAGCCGCTCGGCTACAAAGCATTCCTGGTCGCCGTAGATCGCGAGGCGTGCGCGCTCTACAAGCAGGCACTCGACAAATTGCTGCCGCCCGAATGGACCAGCGCTATTTACACGTCGGCGCAGAATGACAGCGAGCGGTTCCCATTGGTGGCGAAATATCAGCTCAGCGAGACGCAGGAAAAGAAAGACCGGAAGACATTCACGAGGGCGGGACAAAATCCGCAAATCGTCATCGTCACAGACAAGCTGCTGACCGGATACGACGCGGAAATTCTTTACTGCATGTATCTCGATAAGCCGATGCGCGACCACGTGCTGTTGCAAGCGATCGCGCGCGTGAATCGCCCGTATGAGGAAGAAGGAAAATTCAAAAAACCGTGCGGGTTCGTAGTCGATTTTGTTGGTGTGCTCGGGAAGCTGAAGAAGGCGCTCGCGTTCGACTCAAAGCAGGTGGATGTGAGCAAGCTCATCGAGTCGATCGATGTGTTGCTTGCCCGCTTCAAAGAGTTGATGCGAGGCGAAGCGCAAGAGTATCTGCGGCTCACGAAAGGAAAAATTGACGACAAAGCGGTCGAGCGGGCAATCGATTTTTTTGTCAGCAAGGCGAAGCGCGAGAAATTCTATCAATTCTTCAAAGACGTCGAAGCGCTCTACGAGATTTTGTCCCCATCGGCTGAGCTGGCGGACTACATCGACGACTTCCGGAATCTGGCAACGCTTTATCAAATCATTCGGAACGCGTTTGCCGCGAAGACGACGTTCTACGGCGACGTAGCAAAGAAAACCGAACTTTTGATTCGAGAAGAGGCGGAAACGTACGGAGTCAAACAGCCTTCGAAAGTAGTCGAGATCGACGAGAAAACATTGGCGGCGATCAGAGCGAGCAAATCTTCCGACAACAACAAAGTCGTGAATCTGGTCAAGAGCTTGGTGCGGGCGGCCGAAGAAAAAGGCAACGCGGAGCCTTATCTCATTCCGATCGGAGAACGCGCTCAGGAGATCATGGAGGCGTTTGAAGATAGCCAGGAGTCGTCAGTCGAAACACTTCGACAATTGGAGAAGTTGGCGAAGGAACGGATCGAGGCAGAGGAAGAACGCCGACAAACGGGCTTGGACGCGGGCTCGTTCACGATCTATTGGGAATTGAAACGCGAAGGCGTTGAAGATACGAACGCGTTGACAAAGAATGTCAAAGCAGTCTTCGATAGATTTCCTGATTACCGCTACAACGCCGAGGAACTTCGGCAACTCAAAGCCGAGATTTACAAACTGCTGCTAAGCTCGGTGGAGGGCAAGAAAATGGTGGCCATCACTGAGAAGCTCCTAAACCTCGTCCAAGCCTGA
PROTEIN sequence
Length: 973
MPASLATESATVQDPLVRYAGEIGWEIVPQSEAVSLRKGEGGMFFYNLLEETLLRLNPGVITPENVDDVIRRLEGVRNSIEGNAEILAWLRGERSVHVAAEKRQRQVRLVDYENVGQNIFQVSPEWEYTSGLSKPNRADVMFLINGVPVALVETKGAKKGLEEALVQIRRYHRETPEMLTTPQVFDITHLLEFYYGATWSLDRKNLFNWRGEASGNFEAKVKGFFERERFLKMLKEWILFYVKDDELRKTVLRQHQTRAVEKVVQRCADSKKRTGLVWHTQGSGKTFTMITAARLILELKDFFKTPTVLLVVDRNELEGQLTGWVERLLGELSSRDIKIEYAWRKERLRELLGSDFRGLIVSMIHKFDGIPKNINTRDNFYVLIDEAHRSTGGDLGNYLMAALPNATLIGFTGTPIDKTAYGKGTFKVFGKDDEEGYLDKYSIAESISDGTTLKLKYALAPNEIRLPEEILEKEFLDLAEAEGISDVDDLNRILDKAVKLKAFLKSDERVKAVAKFVAKDFKEKVQPLGYKAFLVAVDREACALYKQALDKLLPPEWTSAIYTSAQNDSERFPLVAKYQLSETQEKKDRKTFTRAGQNPQIVIVTDKLLTGYDAEILYCMYLDKPMRDHVLLQAIARVNRPYEEEGKFKKPCGFVVDFVGVLGKLKKALAFDSKQVDVSKLIESIDVLLARFKELMRGEAQEYLRLTKGKIDDKAVERAIDFFVSKAKREKFYQFFKDVEALYEILSPSAELADYIDDFRNLATLYQIIRNAFAAKTTFYGDVAKKTELLIREEAETYGVKQPSKVVEIDEKTLAAIRASKSSDNNKVVNLVKSLVRAAEEKGNAEPYLIPIGERAQEIMEAFEDSQESSVETLRQLEKLAKERIEAEEERRQTGLDAGSFTIYWELKREGVEDTNALTKNVKAVFDRFPDYRYNAEELRQLKAEIYKLLLSSVEGKKMVAITEKLLNLVQA*