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13_1_40cm_4_scaffold_8670_6

Organism: 13_1_40CM_4_Verrucomicrobia_54_4

partial RP 20 / 55 BSCG 18 / 51 ASCG 6 / 38
Location: comp(3789..5249)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa. similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 486.0
  • Bit_score: 799
  • Evalue 2.80e-228
RNA-splicing ligase RtcB n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XHA1_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 486.0
  • Bit_score: 799
  • Evalue 2.00e-228
protein of unknown function UPF0027 similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 486.0
  • Bit_score: 799
  • Evalue 5.60e-229

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Taxonomy

Gloeocapsa sp. PCC 7428 → Gloeocapsa → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGGGCATCATCGACAAAGTGCGAAAAGTCTTGGATACCGTTTGGGAAATACCGGTGACTTACAAAGAAGGCATGCGCGTGCCGGCACGGATCATCGCGACAGAAAAGCTCGTGCGCGAAATGGACGCAGCCGTTTACCAGCAGATCAGCAACGTCGCCACGTTGCCGGGCATCACACGCTACGCGTTTTGCATGCCCGATGGCCACAGCGGCTACGGGTTTCCAATCGGCGGCGTCGCAGCCATGGATGTGCACGAAGGCGGTGTGATCTCGCCTGGCGGCATCGGATTCGACATCAACTGCGGCATGCGTCTGGTCATCACAAACCTGACACTCGACGACGTGCAGCCGCACTTGAAAGAAATTGTCGATCTTCTTTTTCAACGCGTGCCGGCTGGCGTCGGCAGCCATGGATTTTTGAAAATCTCGCGTCAGGAGTTTCGCGACGTCGTCGAGCGGGGCGCGCGCTGGTGTATCGAACACGACTATGGATGGGACGAAGATCTCGAACTTACCGAGGAAAACGGCTGTATCTCTGGCGCGGATGCGGCTAAAATCAGCGAGCGCGCAATTGATCGCGGCTACAACCAAATCGGCACGCTCGGCAGCGGGAACCATTACCTCGAAGTGCAGGCGGCGCGCCCAGAAGACGTGCGCGACAAGGAGCTTGCGGCAAAATTCGGGATCACGATCCCAAACCAGGTTGTCGTCATGTTCCATTGCGGGAGCCGCGGCTTCGGACACCAGGTCGCGACCGATTATCTCCAGATTTTCTTGAAAGTGATGGAGAGCAAATACGGTATCAAAGTGCTCGACCGCGAACTGGCGTGTGCGCCGTTCGAATCCCCTGAGGGGCGCGATTATTTCGCCGCAATGAAATGCGGGCTCAACATGTCATTCGCGAACCGGCAGGTAATCCTTCACCGTATTCGCGAAGTTTTTTCCGAAATTCTCGGACGCAGCGCAGAAGACCTCGGGATGCGGATGATCTACGACGTCGCTCACAACACCGCGAAGCTGGAAAAGCACACGGTCGACGGAAAAGAGAAAACGCTGCTAGTGCATCGCAAAGGCGCGACGCGCGCGTTTGGACCTGGCCGCGAGGAAGTGGCCGCGCGCTACCGCGACATTGGGCAGCCTGTGATCATCGGCGGTTCGATGGAAACTGGCTCGTATCTTCTCGTTGGCACATCAACGGGTGGAGAAACATTTTTCAGCACCGCGCACGGCAGCGGTCGCACCATGAGCCGCACCAAAGCGCGCAAACAATGGCACGGCAGACAGCTCCAGCGCGACTTGGAAGCGCGCGGCATTTACATCCGCAGCACTTCGTGGGCGGGACTCGCTGAGGAAGCGGGCGCTGCTTATAAAGACATCGACGAGGTGATCGAGGCGACGGAGTTGGCTGGGATCAGCAAGCCGGTAGTGCGATTTACGCCGATTGGAAATGTGAAAGGATAA
PROTEIN sequence
Length: 487
MGIIDKVRKVLDTVWEIPVTYKEGMRVPARIIATEKLVREMDAAVYQQISNVATLPGITRYAFCMPDGHSGYGFPIGGVAAMDVHEGGVISPGGIGFDINCGMRLVITNLTLDDVQPHLKEIVDLLFQRVPAGVGSHGFLKISRQEFRDVVERGARWCIEHDYGWDEDLELTEENGCISGADAAKISERAIDRGYNQIGTLGSGNHYLEVQAARPEDVRDKELAAKFGITIPNQVVVMFHCGSRGFGHQVATDYLQIFLKVMESKYGIKVLDRELACAPFESPEGRDYFAAMKCGLNMSFANRQVILHRIREVFSEILGRSAEDLGMRMIYDVAHNTAKLEKHTVDGKEKTLLVHRKGATRAFGPGREEVAARYRDIGQPVIIGGSMETGSYLLVGTSTGGETFFSTAHGSGRTMSRTKARKQWHGRQLQRDLEARGIYIRSTSWAGLAEEAGAAYKDIDEVIEATELAGISKPVVRFTPIGNVKG*