ggKbase home page

13_1_40cm_4_scaffold_2066_6

Organism: 13_1_40CM_4_Acidobacteria_69_4

partial RP 15 / 55 BSCG 19 / 51 ASCG 7 / 38
Location: comp(7818..9221)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein pilR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 462.0
  • Bit_score: 487
  • Evalue 1.60e-134
pilR; transcriptional regulatory protein pilR; K02667 two-component system, NtrC family, response regulator PilR Tax=RBG_16_Deltaproteobacteria_49_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 454.0
  • Bit_score: 500
  • Evalue 2.60e-138
pilR; transcriptional regulatory protein pilR similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 462.0
  • Bit_score: 487
  • Evalue 4.50e-135

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_49_23_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGGACCGCGTCCTGATCGTCGACGACGAGAAAGGGATGCGTGACTTCCTGAGCATCATGCTGAAGAAGGAAGGGTACGCCATCGCCGTGTCCGAGTCCGCGGACAAGGCGGCCGAGCTGATCGCCAAGGGGGACCTCGACCTGGTGATCAGCGACATCTCCATGCCGGGCAGGTCGGGTCTCGAAGTCCTGAAGCAGACGAAGGCCACGAACCCGGAGACGCCGGTGATCATGATCACCGCCTACGCCTCGACGGAGAGCGCCATCGAGGCGCTCAAGCTCGGGGCGTACGACTACATCATCAAGCCGTTCGACGTCGAGGAAATGAAGACGGTCGTCCGCAACGCCCTCGAGAAGCGTCGCCTGGAGAACGAGAACCGCGTGCTCAAGCGGGAGCTCAAGGAGAGGCTGCGCTTCGACGAGCTGGTGGGGGACGGCCCGCGCATGAAAGAGGTCATGGACCTCGTCGCCAAGGTCGCCCCGACCAACAGCACCGTCCTGATCTCCGGAGAGTCGGGCACCGGCAAGGAGCTCGTGGCGCGCGCCATCCACGTCGGCAGCCCCTGCCGCGAGCGACCGTTCGTGTCGATCAACTGCGGAGCGCTGCCGGACGAGCTCCTGGAGAGCGAGCTGTTCGGACACACGCGCGGCTCGTTCACGGGCGCCGTCACCGCCAAGAAGGGCCTGTTCGAGGTGGCCGACGGCGGCACCCTCTTCCTGGACGAGATCGGCGACACCACGACGGCGATGCAGATCAAGCTGCTGCGCGTCCTGCAGGAGCGCCGCATCCGCCGGGTGGGCGGCACCGACGAGATCGAGGTCAACGTGCGCGTCCTGGCGGCGACCAACCAGGACCTCGAGCAGATGGTGCGGCAGAAGCGCTTCCGCGAGGACCTGTACTACCGCATCAACGTCATCCAGATCCGGATGCCGGCGCTGAGGGAGAAGCCGGAGGACATCCCGAAGCTGGCCCTCCACTTCCTCGTCAAGTACGGCCGCATCATGGGGAAGAAGATCACGCGCATCAGCGAGGAGGCCCTGCGGCGTCTTCTGGAGCACGACTGGCCGGGGAACGTGCGCGAGCTGGAGAACGTCATCGAGCGGGCCGTGGCGCTCGAGACCTCGGACGCGATCACCGTCGACAGCCTGTCGCGGGAGGTGCGCAGCGGTGGCGGCCGGCCCGCGCAGGAGTTCCCGATCGTCCTGTCCGACGGTGGCATCGATCTGGAGCGCCAGCTCGAGCGCCTGCGCGAGCATTACATGGAGGAGGCGCTGCGCCGCGCCCAGAACGTGCAGACCAAGGCGGCGGAGATCCTCGGCATGAGCTTCCGCTCGTTCCGATACTTCGCCAAGAAATACCGCCTCCTGGAAGGGCGGAAGGAACCCCGCGCGAACGTGGGCTAA
PROTEIN sequence
Length: 468
MDRVLIVDDEKGMRDFLSIMLKKEGYAIAVSESADKAAELIAKGDLDLVISDISMPGRSGLEVLKQTKATNPETPVIMITAYASTESAIEALKLGAYDYIIKPFDVEEMKTVVRNALEKRRLENENRVLKRELKERLRFDELVGDGPRMKEVMDLVAKVAPTNSTVLISGESGTGKELVARAIHVGSPCRERPFVSINCGALPDELLESELFGHTRGSFTGAVTAKKGLFEVADGGTLFLDEIGDTTTAMQIKLLRVLQERRIRRVGGTDEIEVNVRVLAATNQDLEQMVRQKRFREDLYYRINVIQIRMPALREKPEDIPKLALHFLVKYGRIMGKKITRISEEALRRLLEHDWPGNVRELENVIERAVALETSDAITVDSLSREVRSGGGRPAQEFPIVLSDGGIDLERQLERLREHYMEEALRRAQNVQTKAAEILGMSFRSFRYFAKKYRLLEGRKEPRANVG*