ggKbase home page

13_1_40cm_2_scaffold_2379_11

Organism: 13_1_40CM_2_Archaea_39_4

partial RP 7 / 55 MC: 1 BSCG 3 / 51 ASCG 18 / 38 MC: 1
Location: comp(8267..9130)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator TrmB id=14428555 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 287.0
  • Bit_score: 274
  • Evalue 1.30e-70
transcriptional regulator TrmB Tax=CSP1_1_Thaumarchaeota similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 287.0
  • Bit_score: 274
  • Evalue 1.80e-70
transcriptional regulator TrmB similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 281.0
  • Bit_score: 265
  • Evalue 1.70e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_1_Thaumarchaeota → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 864
ATGCAGACAGAAAAATTAGCAGTAAATTCAGATATCAGTCTCTTTGATACAGAACCAGACTCGCGTCTATATCACTACAAGATACAGCTTGACAAAGTAAAAGACGAGCTTATGAAATTCGGACTTTCATCAAATCAAGCCAAGGTGTACATTTATCTATCAAAATCTGGTCCAAAAAAGGCATCAGACATATTTAAAGCACTAGAGCTGCCAAGGACTGAAACATATGGTATTCTTAACGCATTGCAGAGCCGTGGAATTATCACAGCAGAATTTTCTTCTCCTGTGGTATATGCTGCATTAGACTTGAAGGATACAATTGACGCTCTTGTCAGCGCAGAAAAGGAAAAGATCAACATACTTGCAAAACGCGAAGATAAGCTGATGGAAATGTGGAATGAAATACCAGCATCTATTACGGAAGGAAACACAACAAGAAAAGAACAATTACAAATGCTACAGGGAAATCCACAAATTCATTCTAAATTAAGACAGATGGTAGAAACTGTAAAAGAAGAAATCAAGATATTTTGTACACTGCGGGATCTCTCCAGTTTCTATCATTCAGACATTATTGACATGTTGGCAAAATCACCGGCAGATGTAAAACTCATAATATCGCCAGCATCTATGATACCGACCTATGCACGAAAGATCAATAAAAGAAGAATTAGATTCATGCCTAACACCAAGACAGAAAATCAATGCTTTGTAGTAAAGGATTCTGAAGTTATGATTTTCTTAAGAAATGCAACACACTCACCAAGCAACGTTTTTTCCATATGGACTGATTCGCAAACACTTGCTGAATCTATGATAATGTTGTTTGATTGCTGTTGGGAAAAAACAGAACAGACTCGTTAA
PROTEIN sequence
Length: 288
MQTEKLAVNSDISLFDTEPDSRLYHYKIQLDKVKDELMKFGLSSNQAKVYIYLSKSGPKKASDIFKALELPRTETYGILNALQSRGIITAEFSSPVVYAALDLKDTIDALVSAEKEKINILAKREDKLMEMWNEIPASITEGNTTRKEQLQMLQGNPQIHSKLRQMVETVKEEIKIFCTLRDLSSFYHSDIIDMLAKSPADVKLIISPASMIPTYARKINKRRIRFMPNTKTENQCFVVKDSEVMIFLRNATHSPSNVFSIWTDSQTLAESMIMLFDCCWEKTEQTR*