ggKbase home page

13_1_40cm_3_scaffold_1363_7

Organism: 13_1_40CM_3_Thaumarchaeota_50_5

near complete RP 30 / 55 MC: 2 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 3
Location: 4529..5518

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB4_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 324.0
  • Bit_score: 573
  • Evalue 1.60e-160
  • rbh
tfb4; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 324.0
  • Bit_score: 573
  • Evalue 4.40e-161
Transcription initiation factor IIB {ECO:0000313|EMBL:AFU58283.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nit similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 324.0
  • Bit_score: 573
  • Evalue 2.20e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 990
ATGTATTTACCTCAAATGCAAGCGTCGGTTGTATGCTCTGCATGCAAGAACGAGGTCGTGGTAACAGATCATGAATGCGGCGAAGTTATTTGCAGCCGCTGTGGAATAGTAATTGACAGGATTGAAAGCCCGGCCGTACAGGAATGGCGCGCTTTTAGCGCAGACGAGTTTTTCCGCAAGAGCCGGACGGGCGGTCCTACTTCTCTTGCCCGCTTCAACAAGGGAATGCTCACATCCATAGGCAACGGCAACGCCAGAAAAAACGGGTTGAATTTCAACAGGATGAGGGTTTGGGATTTCAGGATACAGGCCGCTAACGACAGAAGCCTGAAGCAAGCACTGCCCGAGCTCGAGCATCTTAAGGAAAGCCTCGCGCTACCAGAGACAATAGTTGAGAAATCTGCGTACTTTTACAGAAAGTCAAGCAGGCTGGGTCTGATAAAAGGGAGGACCGTGTCTTCGGTCCTTGCCGCTTCAGTCTACCTTGCATGCCGCGAGCTAGAGAACCCAAGGACTTTGAACGAAATTGCGGCCGCGGGCAATATCGCCCGCAAAAAGATCTCACGCGACTACCGGCTATTGGTGCGCATCTTTGACCCCAAAATCCCAACAGTGGACCACGCAAGATGCATCACGCGGATTGCAAACAAGGTTGGCGTCAGCGAAAAAACAAAGAGGATGGCTGTAAGGATAATGCGCCAAATTGTTGCTATGCAGATATCTGCAGGCAAGGGCCCGATGGGTATTGCTGCAACTGTCCTCTACATCGCCTGCCTGCAGGCAGGCGAGGTCAAAACGCAGAAAGAACTTTCGGTCGCCGCCGGCGTCACAGAAGTCACAATCAGGAATCGCTACAGCGAGCTAAAGAAGTACCTGCAGGACTTTGCAAAATCCTCTTCTCTGGCAATGGCAATATTCGTGTTCGCCTTCCAGTCGCCGATCATTATCCACTCTGCCGCAAGGTACGCGACGACCGTATTGCTGCGCTGA
PROTEIN sequence
Length: 330
MYLPQMQASVVCSACKNEVVVTDHECGEVICSRCGIVIDRIESPAVQEWRAFSADEFFRKSRTGGPTSLARFNKGMLTSIGNGNARKNGLNFNRMRVWDFRIQAANDRSLKQALPELEHLKESLALPETIVEKSAYFYRKSSRLGLIKGRTVSSVLAASVYLACRELENPRTLNEIAAAGNIARKKISRDYRLLVRIFDPKIPTVDHARCITRIANKVGVSEKTKRMAVRIMRQIVAMQISAGKGPMGIAATVLYIACLQAGEVKTQKELSVAAGVTEVTIRNRYSELKKYLQDFAKSSSLAMAIFVFAFQSPIIIHSAARYATTVLLR*