ggKbase home page

13_1_40cm_3_scaffold_1492_5

Organism: 13_1_40CM_3_Thaumarchaeota_50_5

near complete RP 30 / 55 MC: 2 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 3
Location: comp(2625..4667)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Ni similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 685.0
  • Bit_score: 1142
  • Evalue 0.0
topA; DNA topoisomerase IA (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 685.0
  • Bit_score: 1141
  • Evalue 0.0
  • rbh
DNA topoisomerase 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBM4_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 685.0
  • Bit_score: 1143
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 2043
TTGTACACGCTTGTTGTCTGCGAAAAGCCTGATGCTGCAAGGAGGATCGCGCAGGCGCTTGGCGACGCAAGGGAATCAAGGCCGGCAGGCATTTCGGTTTTTGACGTGACAAGTGATGGGCGGCAATACAAAGTTTGCACGGCGCTTGGCCACCTTTACGGTGTGGCCGATACGACTAGGAACAGAAGCGTCTATCCAGTGCTTGATCTAGAGTGGGCGCCAAATGTCAAGAACCCAAGGGTGGCTAGAGCGATCAGGGTTATTTCTGATGTTGCAAAAAACGCGTCGGTATTTGTACACGCATGCGACTACGACCAAGAAGGCGAAGTGATAGGCCATAGCATTTTGCAGTACGCGTGTGGCGGCAAGTATGAAAAAGCGCTACGAGCAAAATTCTCAACTCTGACTGACGACGAAATTAGGGAATCGTTCGCCAACCTTGTGAAACCAAACAGCGGCCTTGCAGAGGCTGGACGGTCGCGTCACATGCTTGATTTCATTTACGGCGTCAACTTGTCAAGGGCACTTGCCCAGTCGCTCAAGACAGCCAGAAGATACCGCAACCTCTCGATTGGCAGGGTGCAGGGACCGACCCTTGCGTTTGCAGTCGACAGGGAATTAGAAATCAGGCTACACGTTCCCGACCCCTATTGGACAGTAGCTGCGCAATTTGAAAAAAATGGGAAGGCGTTTTCTGCGCAATACGAGAAACCAAGAGTTGAAACACTGGTTGAAGCCAAATCAATCGTAAGCGCATGCATTGGGAAGGACGGGGCCGTAAGCGATGACGCTGAAAACAAGGTGCTGCTCCGAGCACCAACGCCATTTAACATCGGCGACTTGCAGCGTGAGGCGTACAGGCTGTTTCGGCTTGGTCCCGGTTACACGCTTGGGATAGCGGAGAAATTGTACCTTCAAGCACTAATTTCATATCCACGAACATCGAGCCAAAAGCTGCCGCCTTCAATAGTGTATGGTAAAATAATTTCCGGTCTGTCAAAGATCGGATCTTATGGTAAGCTGACGTCAATGCTCCTCTCAAGGGATCGCCTTGTGCCAAATGAAGGAAAGATGACAGACCCTGCGCACCCCGCGATTTATCCCACAGGTGTTGCGCCGCGGCAGAAACTGAGCGGCCTTGAGTTCAAAGTGTATGACCTTATCGTGAAAAGATTCCTCGCGACGTTTGGCGATCCAGCAGTCAGTCAGCACACTGACGTTAAGATAGACGTGAACGGCTACATCTTCAAGGCTGAAGGCAGGACGCCAGTCTACGAAGGTTGGATGATTTTTTACAAGCCGTACGTCAGGCTGGAGCAGCGGGAACTCCCGGAGCTTCACAAAGACGATTGGGTAAAGAATCTGGGTGTGGAGATGGAGGAAAAGTTTACGCAACCACCCTACCGTTACAATCAGGCGAGTCTGCTTGCAAAGATGGAACAAGAGCAGATCGGAACAAAGGCTACAAGGGCAGATATCATCGCCACTTTGTTCAAGCGAAACTACATTGCTCCTGGCAGACGTGGGATCGAGGTGACAGACCTCGGCTTTGCAGTCATTGACTCTATGAGAATGTTCGTACCGGCCATAGTGTCAATAGAGCTGACAAGGTCTATGGAGGAGCAACTGGAAAAGGTGGAACAGGGCTCTGTTGAAAGTATTTCAGTCATAGAGCTGGCGGTAGACAAGTTGGTAGAATCGCTTGCAGCATTTATGGAAAAAGAGGTCGACATTGGGGAGCGGATAGGCGACGCGGCGTTTGCAGACAGCGCGCAGGCCGCAACGATCGGCCCATGCCCGGTGTGCAAGAAGGGGCAGCTGCGCATGATACGGTCGTACAAAACAAAAAAGAGGTTTGTCGGCTGCTCGAATTATTCTGCCGGCTGCAAAGCCACCGCGCCCTTGCCGCAAAAAGGTTTGATACGGACGGCACGCAAGGCATGTCCCGACTGCGGCTGGCCCATCATTGGAGTAGTTTTTGCAAGGCGAGCAAAGCAGTGGAAAATCTGCATCAACATGCAGTGCCCTGCAAGAAAGAAATGA
PROTEIN sequence
Length: 681
LYTLVVCEKPDAARRIAQALGDARESRPAGISVFDVTSDGRQYKVCTALGHLYGVADTTRNRSVYPVLDLEWAPNVKNPRVARAIRVISDVAKNASVFVHACDYDQEGEVIGHSILQYACGGKYEKALRAKFSTLTDDEIRESFANLVKPNSGLAEAGRSRHMLDFIYGVNLSRALAQSLKTARRYRNLSIGRVQGPTLAFAVDRELEIRLHVPDPYWTVAAQFEKNGKAFSAQYEKPRVETLVEAKSIVSACIGKDGAVSDDAENKVLLRAPTPFNIGDLQREAYRLFRLGPGYTLGIAEKLYLQALISYPRTSSQKLPPSIVYGKIISGLSKIGSYGKLTSMLLSRDRLVPNEGKMTDPAHPAIYPTGVAPRQKLSGLEFKVYDLIVKRFLATFGDPAVSQHTDVKIDVNGYIFKAEGRTPVYEGWMIFYKPYVRLEQRELPELHKDDWVKNLGVEMEEKFTQPPYRYNQASLLAKMEQEQIGTKATRADIIATLFKRNYIAPGRRGIEVTDLGFAVIDSMRMFVPAIVSIELTRSMEEQLEKVEQGSVESISVIELAVDKLVESLAAFMEKEVDIGERIGDAAFADSAQAATIGPCPVCKKGQLRMIRSYKTKKRFVGCSNYSAGCKATAPLPQKGLIRTARKACPDCGWPIIGVVFARRAKQWKICINMQCPARKK*