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13_1_40cm_3_scaffold_1702_2

Organism: 13_1_40CM_3_Thaumarchaeota_50_5

near complete RP 30 / 55 MC: 2 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 3
Location: comp(742..1320)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKU3_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 191.0
  • Bit_score: 345
  • Evalue 4.10e-92
  • rbh
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 191.0
  • Bit_score: 345
  • Evalue 1.10e-92
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitr similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 191.0
  • Bit_score: 345
  • Evalue 5.70e-92

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 579
ATGCTGCCAGGCGAACATGTCTCTTCCATCGAAGAATTTGAGGGAGGCAAGAACACTTATCTTGCTTCTGACGGGACAGTGCGCTCTGCATCAGTAGGAACGAGAGTTTATGATCTAAAACGAAGGATTGTCAAGATTGAGCAAAAGAATTCCCCCATGCTGCCAAAGGTAGGTGACATCATTGTCGGGTACGTCGAAATGCTTTTCAGCAGTATGGTATCGACCAAAGTGCTGTACATCAACGGCAAGTGGTCCGAATCAGGATTTGCGGCCATTGCTTCTGCAAGAGTCGGAAGTCGCGCGGACGTTGACAGGAGGGGAGATAGGCGCGCCACCTTCCATAACGGCGACATCATAAGGGGCAGGGTCATAAGCCTGCTCAATTCCACAATTCATCTTACGCTTGCAGAAAAAGAGTACGGAGTGCTCTATGCACTATGCTTCATGTGCGGCGGCGACACCGTTCGCACCAACGAGAGCACGATAAAATGCGTAGAGTGCGGAGCATTCGAAGATCGCAAGCTGACGCACGACTACGGCAAGGAGGCATTCCGGCTGATACACAAAGCGGGCAAGTAA
PROTEIN sequence
Length: 193
MLPGEHVSSIEEFEGGKNTYLASDGTVRSASVGTRVYDLKRRIVKIEQKNSPMLPKVGDIIVGYVEMLFSSMVSTKVLYINGKWSESGFAAIASARVGSRADVDRRGDRRATFHNGDIIRGRVISLLNSTIHLTLAEKEYGVLYALCFMCGGDTVRTNESTIKCVECGAFEDRKLTHDYGKEAFRLIHKAGK*