ggKbase home page

13_1_40cm_3_scaffold_240519_2

Organism: 13_1_40CM_3_Thaumarchaeota_50_5

near complete RP 30 / 55 MC: 2 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 3
Location: comp(738..1199)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEW9_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 151.0
  • Bit_score: 208
  • Evalue 4.70e-51
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 151.0
  • Bit_score: 248
  • Evalue 4.40e-63
tfb5; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 151.0
  • Bit_score: 208
  • Evalue 1.30e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Bathyarchaeota_38_9_curated → Bathyarchaeota → Archaea

Sequences

DNA sequence
Length: 462
AACGGACTAGTGCGAGGCAGATCTATTGCCGCCATTGCTGCGGCGTCTCTCTACGCCGCCTGTAGATCGTCCGAAACCCCTCGGACATTAAAGGAGGTTGCTGCCGCCAGCAGAATTAAGAAGAAGGATGTGGCTAGATGCTATAGGCTGCTTTTGCGAGAACTCGAAATGTCCATGCCTGTGGAGGATCCGATTAGATGCATTTCGAAGATCGCGAGTAGAGCCGAAATTTCAATGCAGACTCAGCAATCAGCGATCAGAGTCTTGAAAGATGCGAAGAAGAAAGGCGTGGTGGCAGGCAAGGACCCAATGGGCCTGGCGGCGGCGGCGTTGTACGTCGCCTGCGTGCTAGAGAATGAGAAAAAGACTCAGAAGGAAATCGCTGAAATAGCAAATGTGACTGAAGTCACAGTCCGAAATCGGTACAAGGGCCTAAAGGATGCCCTTGGACTGCCCGCCTGA
PROTEIN sequence
Length: 154
NGLVRGRSIAAIAAASLYAACRSSETPRTLKEVAAASRIKKKDVARCYRLLLRELEMSMPVEDPIRCISKIASRAEISMQTQQSAIRVLKDAKKKGVVAGKDPMGLAAAALYVACVLENEKKTQKEIAEIANVTEVTVRNRYKGLKDALGLPA*